| Sequence 1: | NP_003239.2 | Gene: | THBS4 / 7060 | HGNCID: | 11788 | Length: | 961 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_058829.1 | Gene: | Thbs4 / 29220 | RGDID: | 62046 | Length: | 961 | Species: | Rattus norvegicus |
| Alignment Length: | 961 | Identity: | 897/961 - (93%) |
|---|---|---|---|
| Similarity: | 933/961 - (97%) | Gaps: | 0/961 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Human 1 MLAPRGAAVLLLHLVLQRWLAAGAQATPQVFDLLPSSSQRLNPGALLPVLTDPALNDLYVISTFK 65
Human 66 LQTKSSATIFGLYSSTDNSKYFEFTVMGRLNKAILRYLKNDGKVHLVVFNNLQLADGRRHRILLR 130
Human 131 LSNLQRGAGSLELYLDCIQVDSVHNLPRAFAGPSQKPETIELRTFQRKPQDFLEELKLVVRGSLF 195
Human 196 QVASLQDCFLQQSEPLAATGTGDFNRQFLGQMTQLNQLLGEVKDLLRQQVKETSFLRNTIAECQA 260
Human 261 CGPLKFQSPTPSTVVPPAPPAPPTRPPRRCDSNPCFRGVQCTDSRDGFQCGPCPEGYTGNGITCI 325
Human 326 DVDECKYHPCYPGVHCINLSPGFRCDACPVGFTGPMVQGVGISFAKSNKQVCTDIDECRNGACVP 390
Human 391 NSICVNTLGSYRCGPCKPGYTGDQIRGCKAERNCRNPELNPCSVNAQCIEERQGDVTCVCGVGWA 455
Human 456 GDGYICGKDVDIDSYPDEELPCSARNCKKDNCKYVPNSGQEDADRDGIGDACDEDADGDGILNEQ 520
Human 521 DNCVLIHNVDQRNSDKDIFGDACDNCLSVLNNDQKDTDGDGRGDACDDDMDGDGIKNILDNCPKF 585
Human 586 PNRDQRDKDGDGVGDACDSCPDVSNPNQSDVDNDLVGDSCDTNQDSDGDGHQDSTDNCPTVINSA 650
Human 651 QLDTDKDGIGDECDDDDDNDGIPDLVPPGPDNCRLVPNPAQEDSNSDGVGDICESDFDQDQVIDR 715
Human 716 IDVCPENAEVTLTDFRAYQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVD 780
Human 781 FEGTFHVNTQTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSKTGP 845
Human 846 GEHLRNSLWHTGDTSDQVRLLWKDSRNVGWKDKVSYRWFLQHRPQVGYIRVRFYEGSELVADSGV 910
Human 911 TIDTTMRGGRLGVFCFSQENIIWSNLKYRCNDTIPEDFQEFQTQNFDRFDN 961 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| THBS4 | NP_003239.2 | TSPN | 24..192 | CDD:214560 | 149/167 (89%) |
| coiled coil | 219..262 | CDD:293926 | 42/42 (100%) | ||
| TSP-4cc | 219..262 | CDD:293926 | 42/42 (100%) | ||
| EGF | 290..320 | CDD:278437 | 25/29 (86%) | ||
| EGF_CA | 326..360 | CDD:238011 | 30/33 (91%) | ||
| EGF_CA | 379..413 | CDD:238011 | 30/33 (91%) | ||
| TSP type-3 1 | 463..495 | 31/31 (100%) | |||
| TSP type-3 2 | 496..531 | 33/34 (97%) | |||
| TSP3 repeat_long | 496..531 | CDD:275366 | 33/34 (97%) | ||
| TSP_3 | 497..531 | CDD:280556 | 32/33 (97%) | ||
| TSP type-3 3 | 532..554 | 18/21 (86%) | |||
| TSP3 repeat_short | 532..554 | CDD:275366 | 18/21 (86%) | ||
| TSP type-3 4 | 555..590 | 31/34 (91%) | |||
| TSP3 repeat_long | 555..590 | CDD:275365 | 31/34 (91%) | ||
| Cell attachment site. /evidence=ECO:0000255 | 562..564 | 0/1 (0%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 579..672 | 88/92 (96%) | |||
| TSP3 repeat_short | 591..613 | CDD:275365 | 19/21 (90%) | ||
| TSP3 repeat_long | 614..651 | CDD:275365 | 36/36 (100%) | ||
| TSP_3 | 615..651 | CDD:280556 | 35/35 (100%) | ||
| TSP type-3 7 | 652..691 | 38/38 (100%) | |||
| TSP3 repeat_short | 652..691 | CDD:275366 | 38/38 (100%) | ||
| TSP type-3 8 | 692..727 | 30/34 (88%) | |||
| TSP3 repeat_long | 692..723 | CDD:275365 | 27/30 (90%) | ||
| TSP_3 | 693..726 | CDD:280556 | 29/32 (91%) | ||
| TSP_C | 745..942 | CDD:283408 | 196/196 (100%) | ||
| Thbs4 | NP_058829.1 | LamG | 24..192 | CDD:304605 | 149/167 (89%) |
| coiled coil | 219..262 | CDD:293926 | 42/42 (100%) | ||
| TSP-4cc | 219..262 | CDD:293926 | 42/42 (100%) | ||
| EGF_CA | 326..360 | CDD:238011 | 30/33 (91%) | ||
| EGF_CA | 379..413 | CDD:238011 | 30/33 (91%) | ||
| TSP3 repeat_long | 496..531 | CDD:275366 | 33/34 (97%) | ||
| TSP_3 | 497..531 | CDD:280556 | 32/33 (97%) | ||
| TSP3 repeat_short | 532..554 | CDD:275366 | 18/21 (86%) | ||
| TSP3 repeat_long | 555..590 | CDD:275365 | 31/34 (91%) | ||
| TSP3 repeat_short | 591..613 | CDD:275365 | 19/21 (90%) | ||
| TSP3 repeat_long | 614..651 | CDD:275365 | 36/36 (100%) | ||
| TSP_3 | 615..651 | CDD:280556 | 35/35 (100%) | ||
| TSP3 repeat_short | 652..691 | CDD:275366 | 38/38 (100%) | ||
| TSP3 repeat_long | 692..723 | CDD:275365 | 27/30 (90%) | ||
| TSP_3 | 693..726 | CDD:280556 | 29/32 (91%) | ||
| TSP_C | 745..942 | CDD:283408 | 196/196 (100%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C83683053 | |
| Domainoid | 1 | 1.000 | 422 | 1.000 | Domainoid score | I10000 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| HGNC | 1 | 1.500 | - | - | ||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H20691 | |
| Inparanoid | 1 | 1.050 | 1899 | 1.000 | Inparanoid score | I1643 |
| NCBI | 1 | 1.000 | - | - | ||
| OMA | 1 | 1.010 | - | - | QHG49685 | |
| OrthoDB | 1 | 1.010 | - | - | D11539at314146 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0010787 | |
| OrthoInspector | 1 | 1.000 | - | - | oto136518 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_101187 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR10199 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X995 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 16 | 16.410 | |||||