DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Rnf167 and DMA1

DIOPT Version :9

Sequence 1:	NP_081721.1	Gene:	Rnf167 / 70510	MGIID:	1917760	Length:	347	Species:	Mus musculus
Sequence 2:	NP_011983.1	Gene:	DMA1 / 856515	SGDID:	S000001157	Length:	416	Species:	Saccharomyces cerevisiae

Alignment Length:	125	Identity:	39/125 - (31%)
Similarity:	58/125 - (46%)	Gaps:	21/125 - (16%)

- Green bases have known domain annotations that are detailed below.

Mouse   189 GTVLIVRCIQHR------KRLQRNRLTKEQLKQIPTHDYQK---GDEYDVCAICLDEYEDGDKLR 244
            ||..|.||::.:      .:|:.|...||.|.:|  .:.||   |.|.:.|:|||::.:....:.
Yeast   279 GTEEIYRCVKMKIELNKSWKLKANAFNKEALSRI--KNLQKLTTGLEQEDCSICLNKIKPCQAIF 341

Mouse   245 VLPCAHAYHSRCVDPW--LTQTRKTCPICKQPVHRGPGDEE---QEEETQEQEEGDEGEP 299
            :.||||::|..||...  :...:..||.|     |...|.|   :.|...|.|..||.||
Yeast   342 ISPCAHSWHFHCVRRLVIMNYPQFMCPNC-----RTNCDLETTLESESESEFENEDEDEP 396

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rnf167	NP_081721.1	PA_C_RZF_like	20..170	CDD:239038
		zf-RING_2	228..272	CDD:290367	13/45 (29%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	271..347		11/32 (34%)
DMA1	NP_011983.1	FHA	121..308	CDD:224630	8/28 (29%)
DMA1	NP_011983.1	RING-H2_Dmap_like	325..371	CDD:319372	14/50 (28%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X670
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.000