DRSC/TRiP Functional Genomics Resources

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Protein Alignment TGFBR1 and tgfbr1

DIOPT Version :9

Sequence 1:NP_001293139.1 Gene:TGFBR1 / 7046 HGNCID:11772 Length:507 Species:Homo sapiens
Sequence 2:NP_001015961.1 Gene:tgfbr1 / 548715 XenbaseID:XB-GENE-478587 Length:499 Species:Xenopus tropicalis


Alignment Length:499 Identity:424/499 - (84%)
Similarity:446/499 - (89%) Gaps:11/499 - (2%)


- Green bases have known domain annotations that are detailed below.


Human    10 PRLLLLVLAAAAAAAAALLPGATALQCFCHLCTKDNFTCVTDGLCFVSVTETTDKVIHNSMCIAE 74
            |||::|:|.|.|..|.||:       |.|..|.  |.||:|||||.|:|.....||.|||:|||:
 Frog    11 PRLIVLLLIALARWAEALI-------CHCEQCA--NRTCMTDGLCLVNVLIQDGKVTHNSLCIAD 66

Human    75 IDLIPRDRPFVCAPSSKTGSVTTTYCCNQDHCN-KIELPTTGPFSVKSSPGLGPVELAAVIAGPV 138
            .:.:||||||:|..:|..|......||..|.|| |:..|:|.| |.:....||||||||||||||
 Frog    67 SERVPRDRPFMCFSTSTNGIYHNVECCQTDFCNKKLPAPSTSP-SPRPPTNLGPVELAAVIAGPV 130

Human   139 CFVCISLMLMVYICHNRTVIHHRVPNEEDPSLDRPFISEGTTLKDLIYDMTTSGSGSGLPLLVQR 203
            |.|||.|||::|||||||||||||||:||||||||||||||||||||||||||||||||||||||
 Frog   131 CLVCILLMLVLYICHNRTVIHHRVPNDEDPSLDRPFISEGTTLKDLIYDMTTSGSGSGLPLLVQR 195

Human   204 TIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIA 268
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Frog   196 TIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIA 260

Human   269 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 333
            ||||||||||||||||||||||||||||||||||||||:||:|||||||||||||||||||||||
 Frog   261 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMLKLSLSTASGLAHLHMEIVGTQGKPAI 325

Human   334 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFE 398
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Frog   326 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFE 390

Human   399 SFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQ 463
            |||||||||||||||||||||||||||||||||||||||||||||||:|||||||||||||||||
 Frog   391 SFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMKKVVCEQKLRPNIPNRWQ 455

Human   464 SCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGIKM 507
            |||||||||||||||||||||||||||||||||||||||||:||
 Frog   456 SCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGLKM 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TGFBR1NP_001293139.1 Activin_recp 35..114 CDD:279413 37/79 (47%)
TGF_beta_GS 180..207 CDD:285687 26/26 (100%)
Pkinase_Tyr 209..496 CDD:285015 283/286 (99%)
STKc_TGFbR1_ACVR1b_ACVR1c 213..500 CDD:271045 283/286 (99%)
tgfbr1NP_001015961.1 Activin_recp 28..102 CDD:366445 36/82 (44%)
TGF_beta_GS 172..199 CDD:369918 26/26 (100%)
STKc_TGFbR1_ACVR1b_ACVR1c 205..492 CDD:271045 283/286 (99%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 580 1.000 Domainoid score I2635
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H3177
Inparanoid 1 1.050 847 1.000 Inparanoid score I4074
NCBI 1 1.000 - -
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D133913at32523
OrthoFinder 1 1.000 - - FOG0000203
OrthoInspector 1 1.000 - - oto157166
Panther 1 1.100 - - LDO PTHR23255
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X151
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.160

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