DRSC/TRiP Functional Genomics Resources

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Protein Alignment TGFB1I1 and Pax

DIOPT Version :9

Sequence 1:NP_001035919.1 Gene:TGFB1I1 / 7041 HGNCID:11767 Length:461 Species:Homo sapiens
Sequence 2:NP_001033913.1 Gene:Pax / 35215 FlyBaseID:FBgn0041789 Length:581 Species:Drosophila melanogaster


Alignment Length:572 Identity:226/572 - (39%)
Similarity:296/572 - (51%) Gaps:136/572 - (23%)


- Green bases have known domain annotations that are detailed below.


Human     6 ALLSDLETTTSHMPRSGAPKERPAEPLTPPPSYG-----HQP---------QTGSGESSGASGD- 55
            |||:||:.:.            |.:|..|.|.||     ||.         ..|.|...|.:.. 
  Fly    30 ALLADLQNSV------------PGQPQQPQPQYGTVQPKHQALQQQQFVDNTPGYGSLRGKAQPQ 82

Human    56 --KDHLYSTVCKPRSPKPAAPAAPPFSSSSGVLG---------------TGLCELDRLLQELN-- 101
              ::| ||.  :.|||    .|...|:.||...|               |||.|||.|||:|.  
  Fly    83 VYQEH-YSV--ETRSP----TAGHDFNGSSTTPGYANQGSLPRQAAGASTGLSELDSLLQDLQKI 140

Human   102 ---------ATQFNI------------TDEIMSQF------------------------------ 115
                     .:::|.            .|.::.:.                              
  Fly   141 DVPVNYSTPVSKYNTMNSYATVEERPSVDSLLKELDNAHIYAVPNGSAHKSPTPGRHVTITVRET 205

Human   116 -------PSSKVASGEQKEDQSEDKKRPSLPSSPSPGLPKASATSATLELDRLMASLSDFRVQNH 173
                   |...|.:.|::..|.:|...|: .:.|...:.:|..:.||.|||.||||||||:|.|.
  Fly   206 KTEKLTGPDGPVGTVEEQIVQQKDSYTPN-HAVPGQQVHQAYTSQATKELDDLMASLSDFKVSNG 269

Human   174 LPASG-PTQPPVVSST------------NEGSPSP-----------PEPTGKGSLDTMLGLLQSD 214
            ....| .:.|...|||            |:||...           .|.:.:..||:|||.||::
  Fly   270 TNGIGNGSHPQQHSSTVQHQTVTDYARPNKGSQQAHLTQTIEETTIVEDSREDQLDSMLGNLQAN 334

Human   215 LSRRGVPTQAKGLCGSCNKPIAGQVVTALGRAWHPEHFVCGGCSTALGGSSFFEKDGAPFCPECY 279
            :||:||.|..||.|.:|.|||.|||:||||:.||||||.|..||..||..:|||:||.|:|...|
  Fly   335 MSRQGVNTVQKGCCNACEKPIVGQVITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDY 399

Human   280 FERFSPRCGFCNQPIRHKMVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQLFAP 344
            ...|||||.:||..|..|.||||...||.|||.|..||:.||:||||||:|:||||.|:.::|||
  Fly   400 HNLFSPRCAYCNGAILDKCVTALDKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRNDYFEMFAP 464

Human   345 RCQGCQGPILDNYISALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFHARRGSLCATCG 409
            :|.||...|::||||||::.|||||||||:|..||.|||||:|||.|.||.|:||:||||||.|.
  Fly   465 KCNGCNRAIMENYISALNSQWHPDCFVCRDCRQPFQGGSFFDHEGLPYCETHYHAKRGSLCAGCS 529

Human   410 LPVTGRCVSALGRRFHPDHFTCTFCLRPLTKGSFQERAGKPYCQPCFLKLFG 461
            .|:||||::|:.::|||:||.|.|||:.|.||:|:|:..||||..||.|:||
  Fly   530 KPITGRCITAMFKKFHPEHFVCAFCLKQLNKGTFKEQKDKPYCHTCFDKIFG 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TGFB1I1NP_001035919.1 Interaction with PTK2B/PYK2 1..240 92/349 (26%)
Transcription activation. /evidence=ECO:0000250 1..200 71/309 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..87 26/97 (27%)
LD motif 1 3..15 5/8 (63%)
Interaction with PTK2/FAK1. /evidence=ECO:0000250 83..136 19/127 (15%)
Paxillin <86..>106 CDD:308898 11/45 (24%)
LD motif 2 92..104 7/22 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..152 8/35 (23%)
LD motif 3 157..168 9/10 (90%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 172..205 10/56 (18%)
LD motif 4 203..215 7/11 (64%)
LIM1_Paxillin_like 228..280 CDD:259830 30/51 (59%)
LIM2_Paxillin_like 287..338 CDD:188723 30/50 (60%)
LIM3_Paxillin 346..398 CDD:188793 34/51 (67%)
LIM4_Leupaxin 405..456 CDD:188796 27/50 (54%)
PaxNP_001033913.1 LIM1_Paxillin_like 348..400 CDD:259830 30/51 (59%)
LIM2_Paxillin_like 407..458 CDD:188723 30/50 (60%)
LIM3_Paxillin_like 466..518 CDD:188724 34/51 (67%)
LIM4_Paxillin 525..576 CDD:188795 27/50 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165149721
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1703
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2376
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1593918at2759
OrthoFinder 1 1.000 - - FOG0000055
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24216
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1093
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1110.790

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