DRSC/TRiP Functional Genomics Resources

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Protein Alignment TFE3 and tfe3b

DIOPT Version :10

Sequence 1:NP_006512.2 Gene:TFE3 / 7030 HGNCID:11752 Length:575 Species:Homo sapiens
Sequence 2:NP_001038531.1 Gene:tfe3b / 564996 ZFINID:ZDB-GENE-010919-3 Length:451 Species:Danio rerio


Alignment Length:491 Identity:276/491 - (56%)
Similarity:338/491 - (68%) Gaps:69/491 - (14%)


- Green bases have known domain annotations that are detailed below.


Human   111 SSRVLLRQQLMRAQAQEQERRERREQAAAAPFPSPAPASPAISVVGVSAGGHTL----SRPPPAQ 171
            ||||||||||||.|||||||||.::||:.|.. .||..:|||||        :|    :||||||
Zfish     2 SSRVLLRQQLMREQAQEQERREAQQQASVAQL-RPADTTPAISV--------SLPPMAARPPPAQ 57

Human   172 VPREVLKVQTHLENPTRYHLQQARRQQVKQYLSTTLGPKLASQALTPPPGPASAQPLPAPEAAHT 236
            ||.|||||||||||||:||:|||:|||||:|||||||.|:|:|.|...|.|.||.   |||    
Zfish    58 VPVEVLKVQTHLENPTKYHIQQAQRQQVKEYLSTTLGNKVATQTLGVSPVPHSAS---APE---- 115

Human   237 TGPT-GSAPNSPMALLTIGSSSEKEIDDVIDEIISLESSYNDEMLSYLPGGTTGLQLPSTLPVSG 300
            .||: .||||||||.|.:||:.| |:|||||:|||||||:||::||.:   .:|||||:|||  |
Zfish   116 MGPSASSAPNSPMAHLNLGSNKE-EMDDVIDDIISLESSFNDDILSLI---DSGLQLPNTLP--G 174

Human   301 NLLDVYSSQGVATPAITVSNSCPAELPNIKRE------ISETEAKALLKERQKKDNHNLIERRRR 359
            ||||||:|.|:.||.|||||||||:|||||||      :.||||:|.:|||||||||||||||||
Zfish   175 NLLDVYNSPGMTTPTITVSNSCPADLPNIKREYTGNVIVIETEARAFMKERQKKDNHNLIERRRR 239

Human   360 FNINDRIKELGTLIPKSSDPEMRWNKGTILKASVDYIRKLQKEQQRSKDLESRQRSLEQANRSLQ 424
            |||||||||||.|||||:||||||||||||||||||||||||||||:|::|.||:.|||:|::|.
Zfish   240 FNINDRIKELGALIPKSTDPEMRWNKGTILKASVDYIRKLQKEQQRAKEIEMRQKKLEQSNQALI 304

Human   425 LRIQELELQAQIHGLPVPPTPGLLSLATTSASDSLKPE---QLDIEEEGRPGAATFHVGGGPAQN 486
            |||||||:||:.|||....:|||.:.|:...:..|:|.   |..: .:|:| .:..::.|..||.
Zfish   305 LRIQELEIQARHHGLNATVSPGLNTEASFIQNQLLQPNASMQAGV-GDGQP-QSHLNMDGAMAQT 367

Human   487 APHQQPPAPPSDALL------DLHFPS-------DHLGDLGDPFHLGLEDILMEEEEGVVGGLSG 538
            :|......|||.:..      .||..:       :|..||..  .:||.||||::..|       
Zfish   368 SPSPFLSVPPSGSPAAVAVSGPLHLETFSFTELDEHASDLYP--DVGLSDILMDDVRG------- 423

Human   539 GALSPLRAASDPLLSSVSPAVSKASSRRSSFSMEEE 574
                     ||.|.|.:||..||.||:.||.:||::
Zfish   424 ---------SDVLFSPMSPGASKTSSQGSSINMEDD 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TFE3NP_006512.2 MITF_TFEB_C_3_N <165..266 CDD:464952 67/101 (66%)
bHLHzip_TFE3 337..427 CDD:381498 74/89 (83%)
DUF3371 432..573 CDD:463372 46/156 (29%)
tfe3bNP_001038531.1 MITF_TFEB_C_3_N 4..145 CDD:464952 97/157 (62%)
bHLH_SF 217..307 CDD:469605 74/89 (83%)
DUF3371 312..450 CDD:463372 47/157 (30%)

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