DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TFE3 and Tfe3

DIOPT Version :10

Sequence 1:NP_006512.2 Gene:TFE3 / 7030 HGNCID:11752 Length:575 Species:Homo sapiens
Sequence 2:NP_001258156.1 Gene:Tfe3 / 317376 RGDID:1559642 Length:573 Species:Rattus norvegicus


Alignment Length:575 Identity:549/575 - (95%)
Similarity:557/575 - (96%) Gaps:2/575 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSHAAEPARDGVEASAEGPRAVFVLLEERRPADSAQLLSLNSLLPESGIVADIELENVLDPDSFY 65
            ||||.|.||||||||||||||||||||||||||||||||||||||||||||||||||:|||||||
  Rat     1 MSHATETARDGVEASAEGPRAVFVLLEERRPADSAQLLSLNSLLPESGIVADIELENILDPDSFY 65

Human    66 ELKSQPLPLRSSLPISLQATPATPATLSASSSAGGSRTPAMSSSSSSRVLLRQQLMRAQAQEQER 130
            |||||||.|||||||||||||.||||||||||||||||||| |||||||||||||||||||||||
  Rat    66 ELKSQPLSLRSSLPISLQATPTTPATLSASSSAGGSRTPAM-SSSSSRVLLRQQLMRAQAQEQER 129

Human   131 RERREQAAAAPFPSPAPASPAISVVGVSAGGHTLSRPPPAQVPREVLKVQTHLENPTRYHLQQAR 195
            ||||||||||||||||||||||||:||||||||||||||||||||||||||||||||||||||||
  Rat   130 RERREQAAAAPFPSPAPASPAISVIGVSAGGHTLSRPPPAQVPREVLKVQTHLENPTRYHLQQAR 194

Human   196 RQQVKQYLSTTLGPKLASQALTPPPGPASAQPLPAPEAAHTTGPTGSAPNSPMALLTIGSSSEKE 260
            |||||||||||||||||||||||||||:|||||||||.||.||||||||||||||||||||||||
  Rat   195 RQQVKQYLSTTLGPKLASQALTPPPGPSSAQPLPAPETAHATGPTGSAPNSPMALLTIGSSSEKE 259

Human   261 IDDVIDEIISLESSYNDEMLSYLPGGTTGLQLPSTLPVSGNLLDVYSSQGVATPAITVSNSCPAE 325
            |||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
  Rat   260 IDDVIDEIISLESSYNDEMLSYLPGGTAGLQLPSTLPVSGNLLDVYSSQGVATPAITVSNSCPAE 324

Human   326 LPNIKREISETEAKALLKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSSDPEMRWNKGTILK 390
            |||||||||||||||||||||||||||||||||||||||||||||||||||:|||||||||||||
  Rat   325 LPNIKREISETEAKALLKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPEMRWNKGTILK 389

Human   391 ASVDYIRKLQKEQQRSKDLESRQRSLEQANRSLQLRIQELELQAQIHGLPVPPTPGLLSLATTSA 455
            |||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||:|.
  Rat   390 ASVDYIRKLQKEQQRSKDLESRQRSLEQANRSLQLRIQELELQAQIHGLPVPPNPGLLSLATSSV 454

Human   456 SDSLKPEQLDIEEEGRPGAATFHVGGGPAQNAPHQQPPAPPSDALLDLHFPSDHLGDLGDPFHLG 520
            |||||||||||||||||...||||.|||.||||.|||||||||.|||||||||||||||||||||
  Rat   455 SDSLKPEQLDIEEEGRPSTTTFHVSGGPTQNAPPQQPPAPPSDTLLDLHFPSDHLGDLGDPFHLG 519

Human   521 LEDILMEEEEGVVGGLSGGALSPLRAASDPLLSSVSPAVSKASSRRSSFSMEEES 575
            |||||| ||||:|||||||||||||||||||||||||||||:||||||||||:||
  Rat   520 LEDILM-EEEGMVGGLSGGALSPLRAASDPLLSSVSPAVSKSSSRRSSFSMEDES 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TFE3NP_006512.2 MITF_TFEB_C_3_N <165..266 CDD:464952 97/100 (97%)
bHLHzip_TFE3 337..427 CDD:381498 88/89 (99%)
DUF3371 432..573 CDD:463372 127/140 (91%)
Tfe3NP_001258156.1 MITF_TFEB_C_3_N 112..265 CDD:464952 148/152 (97%)
bHLHzip_TFE3 336..426 CDD:381498 88/89 (99%)
DUF3371 431..571 CDD:463372 127/140 (91%)

Return to query results.
Submit another query.