DRSC/TRiP Functional Genomics Resources

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Protein Alignment TFE3 and hlh-30

DIOPT Version :10

Sequence 1:NP_006512.2 Gene:TFE3 / 7030 HGNCID:11752 Length:575 Species:Homo sapiens
Sequence 2:NP_001023411.1 Gene:hlh-30 / 177157 WormBaseID:WBGene00020930 Length:524 Species:Caenorhabditis elegans


Alignment Length:568 Identity:139/568 - (24%)
Similarity:206/568 - (36%) Gaps:218/568 - (38%)


- Green bases have known domain annotations that are detailed below.


Human   117 RQQLMRAQAQEQ--------------------ERRERREQAAAAPF--------PSPAPASPAIS 153
            :||....|||:|                    ...:|||.....|.        .:|..::|..|
 Worm    28 QQQQQPQQAQQQFYDDEPYQANASQFRFGAGKSMEQRRETGNLIPIAQRSMGSTSTPFGSAPTQS 92

Human   154 VVGVSAGGHTLSRPPPAQVPREVLKVQTHLENPTRYHLQQARRQQVKQYLSTTLGPKLASQALTP 218
            ..|..:.|..||.|...|        |||                  |.|...:.|         
 Worm    93 YFGGGSSGAALSSPRKMQ--------QTH------------------QMLFGNIQP--------- 122

Human   219 PPGPASAQPLPAPEAAHTTG--PTGSAPNSPMALLTIGSSSEKEIDD-VIDEIISLESSYNDEML 280
               |..:.|....:..|..|  ||...         :|.....|:|| :|||::.:|   :|:.:
 Worm   123 ---PRGSPPSDGSDKIHRFGESPTPGG---------VGGVFGTELDDLIIDELMGME---DDQRM 172

Human   281 SYLPGGTTGLQL--------------------------PSTLP--VSGNLLDVYSSQGVATPAIT 317
            .  ||.|..:.:                          |.|:|  :|.|...|            
 Worm   173 R--PGATRPMTIGGEKTMSMARPIPGASSRAGSGHSGSPITIPNAMSNNFRQV------------ 223

Human   318 VSNSCPAELPNIKREI-----------SETEAKALLKERQKKDNHNLIERRRRFNINDRIKELGT 371
            ||:|.|....:|::.|           .:.:.:...::|:|||.||:||||||:||||||||||.
 Worm   224 VSSSAPTSSIDIEKMIGAVSNGGGNSGGDNDPEDYYRDRRKKDIHNMIERRRRYNINDRIKELGQ 288

Human   372 LIPKSSDPEMRWNKGTILKASVDYIRKLQKEQQRSKDLESRQRSLEQANRSLQLRIQELELQAQI 436
            ::||::..:|:.|||||||||.||||.|||:::::...:.:|:|||........|::|||.....
 Worm   289 MLPKNTSEDMKLNKGTILKASCDYIRVLQKDREQAMKTQQQQKSLESTAHKYADRVKELEEMLAR 353

Human   437 HGLPVPP-------------------------TP--------GLLSLAT--------TSASDSLK 460
            .|:.|||                         ||        |.||..|        ||.:|| :
 Worm   354 QGVQVPPSHLPPIPKVIERPIKQEIDESPPNHTPTGSFVSSSGFLSEVTNNTAAMQITSPNDS-R 417

Human   461 PEQLDIEEEGRPGAATFHVGGGPAQNAPHQQPPAPP----SDALLDLHFPSDHLGDLGDPFHLGL 521
            |.  :......|..:.|.||..           :||    |........|..:          ..
 Worm   418 PN--NFMNNSAPSDSFFSVGSA-----------SPPDYRTSSGTASWKLPGSN----------AF 459

Human   522 EDILMEEEEGVVGGLSGGALSPLRAASDPLLSSVS--PAVSKASSRRS 567
            .|::|::...::.|             |||:||..  |:....||:.|
 Worm   460 SDLMMDDLNPMMNG-------------DPLISSAGAHPSPHFHSSQMS 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TFE3NP_006512.2 MITF_TFEB_C_3_N <165..266 CDD:464952 19/103 (18%)
bHLHzip_TFE3 337..427 CDD:381498 45/89 (51%)
DUF3371 432..573 CDD:463372 35/183 (19%)
hlh-30NP_001023411.1 bHLHzip_MITF_like 260..328 CDD:381403 41/67 (61%)

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