DRSC/TRiP Functional Genomics Resources

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Protein Alignment TFE3 and tfe3a

DIOPT Version :10

Sequence 1:NP_006512.2 Gene:TFE3 / 7030 HGNCID:11752 Length:575 Species:Homo sapiens
Sequence 2:NP_571923.2 Gene:tfe3a / 114834 ZFINID:ZDB-GENE-010919-2 Length:539 Species:Danio rerio


Alignment Length:603 Identity:321/603 - (53%)
Similarity:391/603 - (64%) Gaps:108/603 - (17%)


- Green bases have known domain annotations that are detailed below.


Human     2 SHAAEPARDGVEASAEGPRAVFVLLEERRPADSAQLLSLNSLLPESGIVADIELENVL--DPDSF 64
            |..|.|.:.|    .|.|:.|:|:|:.   |:|..|:|:..||||||||||||:|:|.  |.|:|
Zfish    14 SEVASPGQQG----HERPQTVYVILDS---AESVNLISVEPLLPESGIVADIEVESVFSADSDAF 71

Human    65 YELKSQPLPLRSSLPISLQATPATPATLSASSSAGGSRTPAMSSSSSSRVLLRQQLMRAQAQEQE 129
            ||||.||:....||   ..|.|.||.                .|..:||||:||:|||.|||:||
Zfish    72 YELKGQPITPSGSL---TSADPVTPT----------------GSVMTSRVLMRQELMRQQAQDQE 117

Human   130 RRERREQAAAAPFPSPAPASPAISVVGVSAGGHTLSRPP--PAQVPREVLKVQTHLENPTRYHLQ 192
            |||.::||::|. .....::|||||.         |..|  |.|||.|||||||||||||:||:|
Zfish   118 RREAQKQASSAQ-QRLTDSTPAISVA---------SNLPAKPTQVPVEVLKVQTHLENPTKYHIQ 172

Human   193 QARRQQVKQYLSTTLGPKLASQAL--TPPPGPASAQPLPAPEAAHTTGPTGSAPNSPMALLTIGS 255
            ||:|||||||||.|||.|:|||.|  :|||.|:||..| ||.|:       |.|:||:|:|::||
Zfish   173 QAQRQQVKQYLSHTLGNKIASQTLATSPPPQPSSAPEL-APAAS-------STPSSPLAVLSLGS 229

Human   256 SSEKEIDDVIDEIISLESSYNDEMLSYLPGGTTGLQLPSTLPVSGNLLDVYSSQGVATPAITVSN 320
            :.| ||:||||:|||||||.|||.::.:   .:||||||||||||||||||||||:|.|.|||||
Zfish   230 NKE-EIEDVIDDIISLESSLNDEFMTLI---DSGLQLPSTLPVSGNLLDVYSSQGMAAPTITVSN 290

Human   321 SCPAELPNIKREISETEAKALLKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSSDPEMRWNK 385
            ||||:|.|:|||:|:.||||::|||||||||||||||||||.||||||||.|||||||||:||||
Zfish   291 SCPADLQNVKREMSDAEAKAIMKERQKKDNHNLIERRRRFNTNDRIKELGALIPKSSDPELRWNK 355

Human   386 GTILKASVDYIRKLQKEQQRSKDLESRQRSLEQANRSLQLRIQELELQAQIHGLPVPPTPGLLSL 450
            ||||||||||||||||||||||::|:||:.||.|||||.|||||||:||::||           |
Zfish   356 GTILKASVDYIRKLQKEQQRSKEMETRQKKLEHANRSLMLRIQELEMQARLHG-----------L 409

Human   451 ATTSASDSLKPEQ-LDIEEEGR--------------------PGAATFHVGGGPAQNAPHQQPPA 494
            :::..||||...| |.:|....                    |.::|..|||         ...:
Zfish   410 SSSQLSDSLTQTQTLTLEHNPNTDLSKTLLSITQTTPSSFLSPPSSTSSVGG---------TVTS 465

Human   495 PPSDALLDLHFPSDHLGDLGDP---FHLGLEDILMEEEEGVVGGLSGGALSPLRAASDPLLSSVS 556
            |.....|......||...:..|   ..:||.||||::         .|||||:..| |||||:||
Zfish   466 PLELGTLSFGELDDHTASVFSPALMADMGLGDILMDD---------SGALSPVGGA-DPLLSAVS 520

Human   557 PAVSKASSRRSSFSMEEE 574
            |..||.|||||||||||:
Zfish   521 PGASKTSSRRSSFSMEED 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TFE3NP_006512.2 MITF_TFEB_C_3_N <165..266 CDD:464952 64/104 (62%)
bHLHzip_TFE3 337..427 CDD:381498 77/89 (87%)
DUF3371 432..573 CDD:463372 53/164 (32%)
tfe3aNP_571923.2 MITF_TFEB_C_3_N 101..239 CDD:464952 88/156 (56%)
bHLHzip_MITF 305..408 CDD:381496 85/102 (83%)
DUF3371 402..538 CDD:463372 54/165 (33%)

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