DRSC/TRiP Functional Genomics Resources

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Protein Alignment TFAP2B and aptf-1

DIOPT Version :10

Sequence 1:XP_016866722.1 Gene:TFAP2B / 7021 HGNCID:11743 Length:515 Species:Homo sapiens
Sequence 2:NP_495300.2 Gene:aptf-1 / 187043 WormBaseID:WBGene00019424 Length:365 Species:Caenorhabditis elegans


Alignment Length:401 Identity:140/401 - (34%)
Similarity:201/401 - (50%) Gaps:98/401 - (24%)


- Green bases have known domain annotations that are detailed below.


Human   118 SDFQPPY------FPPPYQ--------PLPYHQSQDPYSHVND-PYSLN-PLHQPQQH----PWG 162
            |..:||:      |.|.:.        |.|.|..|.|...|:. .|:.. |:...||.    |..
 Worm    32 SSQRPPFYENMRTFAPSHMHISCHYDIPYPPHLIQPPVCGVSTFTYAREFPVSNSQQFFNVTPPQ 96

Human   163 QRQRQEVGSEAGSLLPQPRAALPQLSGLDPRRDYHSVR----RPDVLLHSAHHGLDAGMGDSLSL 223
            |:|:|..|...     :....:|:....|...:|..|.    ||.|...|               
 Worm    97 QQQQQGTGGSG-----EEDYCIPKSEDRDHSSNYSQVATKQDRPFVFFAS--------------- 141

Human   224 HGLGHPGMEDVQSVEDANNSGMNLLDQSVIKKVPVPPKSVTSLMMNKDGFLGGMSVNTGEVFCSV 288
                     |.||                       |..:                 .|||:|:|
 Worm   142 ---------DCQS-----------------------PLEI-----------------VGEVYCTV 157

Human   289 PGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLRERLEKIGLNLPAG 353
            |||.||||||:||:|||.|:|||:|||||||||||||:||:||||:||::||:.|:|:||.||||
 Worm   158 PGRTSLLSSTTKYRVTVAEIQRRISPPECLNASLLGGILRKAKSKDGGKTLRDSLKKLGLTLPAG 222

Human   354 RRKAANVTLLTSLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQH--TDPSDLHSRKNMLLATK 416
            |||.||||..|:|||.||:|:|::|..:||.||.::.:..||.:..  .|| |:..|:..|..::
 Worm   223 RRKQANVTAWTALVEEEAIHMAKEFALVCEKEFHSREIGIYLTKTSLAIDP-DVVKRRTALEMSR 286

Human   417 QLCKEFTDLLAQDRTPIGNSRPSPIL--EPGIQSCLTHFSLITHGFGAPAICAALTALQNYLTEA 479
            ::..|..:||:.||||:....|..:|  :|.:|..|:||:|:|||||..|:.|.|.:::..:.|:
 Worm   287 KVVGELAELLSCDRTPLTPYFPRNMLPIDPSVQQHLSHFTLMTHGFGNVAMSAVLESVKLMIDES 351

Human   480 LKGMDKMFLNN 490
            :|.:|:....|
 Worm   352 IKYIDRCCSQN 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TFAP2BXP_016866722.1 TF_AP-2 285..479 CDD:460877 101/197 (51%)
aptf-1NP_495300.2 TF_AP-2 154..351 CDD:460877 101/197 (51%)

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