DRSC/TRiP Functional Genomics Resources

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Protein Alignment TFAM and Sox102F

DIOPT Version :10

Sequence 1:NP_003192.1 Gene:TFAM / 7019 HGNCID:11741 Length:246 Species:Homo sapiens
Sequence 2:NP_001014695.1 Gene:Sox102F / 43844 FlyBaseID:FBgn0039938 Length:618 Species:Drosophila melanogaster


Alignment Length:125 Identity:29/125 - (23%)
Similarity:54/125 - (43%) Gaps:25/125 - (20%)


- Green bases have known domain annotations that are detailed below.


Human    51 KKPVSSYLRFSK-EQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEI 114
            |:|:::::.::| |:..|.|| .||...:.:.:.:..||:.:.::.|           |.|.||.
  Fly   424 KRPMNAFMVWAKDERRKILKA-CPDMHNSNISKILGARWKAMSNADK-----------QPYYEEQ 476

Human   115 SRFKEQLTPSQIMSLEKEIMDKHLKRKAMTKKKELTLLGKPKRPRSAYNVYVAERFQEAK 174
            ||            |.|..|::|...:...:.|...::...|...|.|.|.:..|..|.:
  Fly   477 SR------------LSKLHMEQHPDYRYRPRPKRTCIVDGKKMRISEYKVLMRNRRAEMR 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TFAMNP_003192.1 HMG-box_TFAM_rpt1 50..115 CDD:438802 16/64 (25%)
HMG-box_TFAM_rpt2 135..234 CDD:438803 8/40 (20%)
Sox102FNP_001014695.1 HMG-box_EGL13-like 421..498 CDD:438848 22/97 (23%)

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