DRSC/TRiP Functional Genomics Resources

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Protein Alignment TFAM and CG12104

DIOPT Version :10

Sequence 1:NP_003192.1 Gene:TFAM / 7019 HGNCID:11741 Length:246 Species:Homo sapiens
Sequence 2:NP_647629.1 Gene:CG12104 / 38187 FlyBaseID:FBgn0035238 Length:250 Species:Drosophila melanogaster


Alignment Length:83 Identity:18/83 - (21%)
Similarity:40/83 - (48%) Gaps:0/83 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    43 SSVLASCPKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEW 107
            :..:|..|.||::.:..|.::.:...|.|||.....::...:...|..|.:::|.:|...:..|.
  Fly    69 NQAMAQAPPKPLAPFALFFRDTVTAIKQQNPTCSLEQMQVIVQTMWESLDETQKNVYALRHEQEK 133

Human   108 QVYKEEISRFKEQLTPSQ 125
            :.|...:..::.||:.|:
  Fly   134 REYVRLMRGYRHQLSESE 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TFAMNP_003192.1 HMG-box_TFAM_rpt1 50..115 CDD:438802 14/64 (22%)
HMG-box_TFAM_rpt2 135..234 CDD:438803
CG12104NP_647629.1 HMG-box_SF 78..144 CDD:469606 13/65 (20%)
Blue background indicates that the domain is not in the aligned region.

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