DRSC/TRiP Functional Genomics Resources

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Protein Alignment TFAM and Sox15

DIOPT Version :10

Sequence 1:NP_003192.1 Gene:TFAM / 7019 HGNCID:11741 Length:246 Species:Homo sapiens
Sequence 2:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster


Alignment Length:127 Identity:32/127 - (25%)
Similarity:55/127 - (43%) Gaps:18/127 - (14%)


- Green bases have known domain annotations that are detailed below.


Human     6 SMWGVLSALGRSGAELCT-GCGSRLRS---PFSFVYLPRWFSSVLA--SCPKKPVSSYLRFSKEQ 64
            |||    :....| :||. .||...|.   |....|.|....|..|  |..::|:::::.::|.:
  Fly   170 SMW----SYDYKG-DLCAPNCGYLERHKPLPADLKYRPGGTQSKSAKESRIRRPMNAFMVWAKIE 229

Human    65 LPIFKAQNPDAKTTELIRRIAQRWREL-PDSKKKIYQDAYR------AEWQVYKEEISRFKE 119
            ......:|||....:|.:.:.::||.| |..::...::|.|      .|...||....|.|:
  Fly   230 RKKLADENPDLHNADLSKMLGKKWRSLTPQDRRPYVEEAERLRVIHMTEHPNYKYRPRRRKQ 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TFAMNP_003192.1 HMG-box_TFAM_rpt1 50..115 CDD:438802 15/71 (21%)
HMG-box_TFAM_rpt2 135..234 CDD:438803
Sox15NP_523739.2 HMG-box_SoxF 214..289 CDD:438841 15/74 (20%)
PHA03273 305..>391 CDD:223031
Blue background indicates that the domain is not in the aligned region.

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