DRSC/TRiP Functional Genomics Resources

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Protein Alignment ACTC1 and Arp1

DIOPT Version :10

Sequence 1:NP_005150.1 Gene:ACTC1 / 70 HGNCID:143 Length:377 Species:Homo sapiens
Sequence 2:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster


Alignment Length:370 Identity:201/370 - (54%)
Similarity:271/370 - (73%) Gaps:7/370 - (1%)


- Green bases have known domain annotations that are detailed below.


Human    10 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 74
            :|.|||||::||||||:..|:..||:.:|||:|..||.|..:.|.:||.:|:..||:|:::||:|
  Fly    12 VVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALEGDIFVGPKAEEHRGLLSIRYPME 76

Human    75 HGIITNWDDMEKIWHHTFYNE-LRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAI 138
            |||:|:|:|||:||.:.:..| |....|:||.|||||||||:.||||..:..||..|.||::|::
  Fly    77 HGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFEGINAPALFVSM 141

Human   139 QAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFV 203
            ||||||||:||.||:||||||||||.||||||:|:||:|||:|:||||:|.||..::...|::|.
  Fly   142 QAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYLKTLIRREGFNFR 206

Human   204 TTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK-SYELPDGQVITIGNERFRCPETLFQPS 267
            :|||.||||.||||:||:|.:.:.|     .:...|| :|:||||::..||..|||.||.||:|.
  Fly   207 STAEFEIVRSIKEKVCYLATNPQKE-----ETVETEKFAYKLPDGKIFEIGPARFRAPEVLFRPD 266

Human   268 FIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 332
            .:|.|..|||:....||.|.|:|:||.||.|.|||||:|::.|..||:..|:...:...:||:|.
  Fly   267 LLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKKHSAKDLKIRIA 331

Human   333 APPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPSIVHRKCF 377
            ||.||.||.|:||||||||.||::|||||:||:|.|...||||.|
  Fly   332 APQERLYSTWMGGSILASLDTFKKMWISKREYEEEGQKAVHRKTF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACTC1NP_005150.1 ASKHA_NBD_actin 8..372 CDD:466823 196/363 (54%)
Arp1NP_524331.2 ASKHA_NBD_Arp1 9..375 CDD:466820 199/367 (54%)

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