DRSC/TRiP Functional Genomics Resources

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Protein Alignment ACTC1 and Arp3

DIOPT Version :10

Sequence 1:NP_005150.1 Gene:ACTC1 / 70 HGNCID:143 Length:377 Species:Homo sapiens
Sequence 2:NP_523968.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster


Alignment Length:419 Identity:154/419 - (36%)
Similarity:215/419 - (51%) Gaps:61/419 - (14%)


- Green bases have known domain annotations that are detailed below.


Human     9 ALVCDNGSGLVKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEAQSKRG 65
            |.|.|.|:|..|.||||:..|:.:.||.        ||....:.:..|:...|.::||||....|
  Fly     7 ACVIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVGDTNTRRITKGIEDLDFFIGDEAFDATG 71

Human    66 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFN 130
             .::|||:.||::.:||.||:......:..||..||:|..||||.|||...|||...:|||||||
  Fly    72 -YSIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFETFN 135

Human   131 VPAMYVAIQAVLSLYAS-------GRT-TGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDL 187
            ||.:|:|:||||:|.||       .|| ||||:||||||||.:|:.|||.:...|..:.:|||::
  Fly   136 VPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRNI 200

Human   188 TDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVI-- 250
            |.::..:|.||..........|..:.||||.||:..|...|.|          .|:...|:.|  
  Fly   201 TSFIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKEFA----------KYDTEPGKWIRN 255

Human   251 --------------TIGNERFRCPETLFQPSFIGME-SAGIHETTYNSIMKCDIDIRKDLYANNV 300
                          .:|.|||..||..|.|.|...: :..:.|...|.|..|.||:|:.||.|.|
  Fly   256 FSGVNTVTKAPFNVDVGYERFLGPEIFFHPEFSNPDFTIPLSEIVDNVIQNCPIDVRRPLYNNIV 320

Human   301 LSGGTTMYPGIADRMQKEIT----------------ALAPSTMKIKIIAPPERKYSVWIGGSILA 349
            ||||:||:.....|:|::|.                .:.|..:.:::|....::|:||.|||:||
  Fly   321 LSGGSTMFKDFGRRLQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLA 385

Human   350 SLSTFQQMWISKQEYDEAGPSIV-HRKCF 377
            |...|.|:..:|..|:|.||||. |...|
  Fly   386 STPEFYQVCHTKAAYEEYGPSICRHNPVF 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACTC1NP_005150.1 ASKHA_NBD_actin 8..372 CDD:466823 151/411 (37%)
Arp3NP_523968.1 ASKHA_NBD_Arp3-like 7..410 CDD:466822 152/413 (37%)

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