DRSC/TRiP Functional Genomics Resources

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Protein Alignment ACTC1 and Arp53D

DIOPT Version :10

Sequence 1:NP_005150.1 Gene:ACTC1 / 70 HGNCID:143 Length:377 Species:Homo sapiens
Sequence 2:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster


Alignment Length:369 Identity:236/369 - (63%)
Similarity:290/369 - (78%) Gaps:5/369 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     9 ALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 73
            |:|.|||||:.||||:.:|.||||||||||||||..|::.....||.:|:.|..|||||||||||
  Fly    48 AVVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNVLLDSVIGDSVIGEAAARKRGILTLKYPI 112

Human    74 EHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAI 138
            |||::.|||:||.:|.|| |..||..|.:.|.||||||||||.||||||:||||.|.|||.|||:
  Fly   113 EHGMVKNWDEMEMVWQHT-YELLRADPMDLPALLTEAPLNPKKNREKMTEIMFEHFQVPAFYVAV 176

Human   139 QAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFV 203
            ||||||||:|||.|||:||||||||.||||||:|||||.:|:|||||||||||.|:|.|||.:..
  Fly   177 QAVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYLCKLLLERGVTMG 241

Human   204 TTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSF 268
            |:|||||||:||||||||::::..||    ......::|||||||.|.:|.|||||||.|||||.
  Fly   242 TSAEREIVREIKEKLCYVSMNYAKEM----DLHGKVETYELPDGQKIVLGCERFRCPEALFQPSL 302

Human   269 IGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIA 333
            :|.|..||||.|::||..||:|:|||:|||.||||||||:..|..|..:::|.:||.:::||:.|
  Fly   303 LGQEVMGIHEATHHSITNCDMDLRKDMYANIVLSGGTTMFRNIEHRFLQDLTEMAPPSIRIKVNA 367

Human   334 PPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPSIVHRKCF 377
            .|:|::|||.|||:||||::||.|||...||:|.|.:|||||||
  Fly   368 SPDRRFSVWTGGSVLASLTSFQNMWIDSLEYEEVGSAIVHRKCF 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACTC1NP_005150.1 ASKHA_NBD_actin 8..372 CDD:466823 229/362 (63%)
Arp53DNP_477037.2 ASKHA_ATPase-like 47..406 CDD:483947 229/362 (63%)

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