DRSC/TRiP Functional Genomics Resources

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Protein Alignment ACTC1 and Arp2

DIOPT Version :10

Sequence 1:NP_005150.1 Gene:ACTC1 / 70 HGNCID:143 Length:377 Species:Homo sapiens
Sequence 2:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster


Alignment Length:392 Identity:184/392 - (46%)
Similarity:253/392 - (64%) Gaps:20/392 - (5%)


- Green bases have known domain annotations that are detailed below.


Human     3 DDEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGV-MVG------MGQKDSYVGDEA 60
            |.:....:|||||:|.||.|:||.:.|..:|||:||||..:.| .:|      :...|..|||||
  Fly     2 DSKGRNVIVCDNGTGFVKCGYAGSNFPTHIFPSMVGRPMIRAVNKIGDIEVKDLHVDDLMVGDEA 66

Human    61 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPTLLTEAPLNPKANREKMTQI 124
            ...|.:|.:.||:|:|::.|||||..:|.:|| ..::.:.|.....||||.|:||..|||||.::
  Fly    67 SQLRSLLEVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMIEV 131

Human   125 MFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTD 189
            |||.:...:.|:||||||:|||.|..:|:|:||||||||..|:||.:||||...|||:||||:|.
  Fly   132 MFEKYGFDSAYIAIQAVLTLYAQGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIAGRDITR 196

Human   190 YLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGN 254
            ||:|:|..|||:|..:|:.|.||.:||||||:..|.|.|...|..::.|.:||.||||:||.:|.
  Fly   197 YLIKLLLLRGYAFNHSADFETVRIMKEKLCYIGYDIEMEQRLALETTVLVESYTLPDGRVIKVGG 261

Human   255 ERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEI 319
            |||..||.||||..|.:|..||.|..:|:|...|||||.:||.:.|||||:|||||:..|:::||
  Fly   262 ERFEAPEALFQPHLINVEGPGIAELAFNTIQAADIDIRPELYKHIVLSGGSTMYPGLPSRLEREI 326

Human   320 TAL-----------APSTMKIKIIAPPERKYSVWIGGSILASLSTFQQ-MWISKQEYDEAGPSIV 372
            ..|           ..:..||:|..||.||..|:|||::||.::..:. .|:|||||.|.|..::
  Fly   327 KQLYLERVLKNDTEKLAKFKIRIEDPPRRKDMVFIGGAVLAEVTKDRDGFWMSKQEYQEQGLKVL 391

Human   373 HR 374
            .:
  Fly   392 QK 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACTC1NP_005150.1 ASKHA_NBD_actin 8..372 CDD:466823 183/383 (48%)
Arp2NP_001259621.1 ASKHA_NBD_Arp2 7..393 CDD:466821 183/385 (48%)

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