DRSC/TRiP Functional Genomics Resources

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Protein Alignment ACTC1 and Arp6

DIOPT Version :10

Sequence 1:NP_005150.1 Gene:ACTC1 / 70 HGNCID:143 Length:377 Species:Homo sapiens
Sequence 2:NP_511165.1 Gene:Arp6 / 32514 FlyBaseID:FBgn0011741 Length:398 Species:Drosophila melanogaster


Alignment Length:396 Identity:105/396 - (26%)
Similarity:190/396 - (47%) Gaps:47/396 - (11%)


- Green bases have known domain annotations that are detailed below.


Human    10 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKY--P 72
            :|.|||:...|.|.|..|.|..| |:.:.:.:.:       ::.::||::....|....|.|  .
  Fly     6 VVLDNGAHTAKVGLANQDEPHVV-PNCIMKAKSE-------RRRAFVGNQIDECRDTSALYYILA 62

Human    73 IEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYV 136
            .:.|.:.||...:.:|.:.|..: :..:.|....::||..:|.::.:|...:|:||.:.|..:|.
  Fly    63 FQRGYLLNWHTQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKVDGVYK 127

Human   137 AIQAVLSLY-----ASGRTT-----GIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYL 191
            ...|.|:.:     :..|||     .|::|.|...||.||...|..:...|.|:|:.|:.||:.|
  Fly   128 TTAADLAAFNYVADSEERTTMESLNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGKALTNQL 192

Human   192 MKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK---SYELPD------- 246
            .::::.|..:.:.  |..:|..|||.:|:||.||:..|....|.....:   .|.|||       
  Fly   193 KELISYRHLNVMD--ESHVVNQIKEDVCFVAEDFKQAMQVHYSEEKRREVTVDYVLPDFTTVKRG 255

Human   247 --------------GQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYA 297
                          .|::::.||||..||.||.||.||::..||.|...:.:..|..:..::|..
  Fly   256 YVRVPGKPREDEEQQQMVSLCNERFTVPELLFNPSDIGVQQVGIPEAVADCLKACPWEAHRELLL 320

Human   298 NNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 362
            |.::.||:..:||...|:::::.||.|..:::.:|.|.:.....|.||..:|:...|::...::.
  Fly   321 NILIVGGSAQFPGFLPRLKRDLRALVPDDLEVSLICPEDPVRYAWYGGKEVATSPNFEEFVYTQD 385

Human   363 EYDEAG 368
            :|:|.|
  Fly   386 DYEEYG 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACTC1NP_005150.1 ASKHA_NBD_actin 8..372 CDD:466823 105/396 (27%)
Arp6NP_511165.1 ASKHA_NBD_Arp6 5..391 CDD:466816 104/394 (26%)

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