DRSC/TRiP Functional Genomics Resources

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Protein Alignment ACTC1 and act1

DIOPT Version :10

Sequence 1:NP_005150.1 Gene:ACTC1 / 70 HGNCID:143 Length:377 Species:Homo sapiens
Sequence 2:NP_595618.1 Gene:act1 / 2540051 PomBaseID:SPBC32H8.12C Length:375 Species:Schizosaccharomyces pombe


Alignment Length:374 Identity:333/374 - (89%)
Similarity:351/374 - (93%) Gaps:0/374 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     4 DEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 68
            :||..|||.|||||:.|||||||||||||||||||||||.|:|||||||||||||||||||||||
pombe     2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSKRGILT 66

Human    69 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPA 133
            |||||||||:.|||||||||||||||||||||||||.||||||||||:||||||||:|||||.||
pombe    67 LKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKSNREKMTQIIFETFNAPA 131

Human   134 MYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTER 198
            .|||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||.||
pombe   132 FYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILMER 196

Human   199 GYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETL 263
            ||:|.|||||||||||||||||||||||.|:.|||.||||||||||||||||||||||||.||.|
pombe   197 GYTFSTTAEREIVRDIKEKLCYVALDFEQELQTAAQSSSLEKSYELPDGQVITIGNERFRAPEAL 261

Human   264 FQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMK 328
            ||||.:|:|:|||||.|||||||||:|||||||.|.|:||||||||||||||||||.|||||:||
pombe   262 FQPSALGLENAGIHEATYNSIMKCDVDIRKDLYGNVVMSGGTTMYPGIADRMQKEIQALAPSSMK 326

Human   329 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPSIVHRKCF 377
            :||:||||||||||||||||||||||||||||||||||:||.||:||||
pombe   327 VKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVYRKCF 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACTC1NP_005150.1 ASKHA_NBD_actin 8..372 CDD:466823 325/363 (90%)
act1NP_595618.1 ASKHA_NBD_actin 6..370 CDD:466823 325/363 (90%)

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