DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TCF15 and twi

DIOPT Version :9

Sequence 1:NP_004600.3 Gene:TCF15 / 6939 HGNCID:11627 Length:199 Species:Homo sapiens
Sequence 2:NP_001033967.1 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster


Alignment Length:131 Identity:50/131 - (38%)
Similarity:65/131 - (49%) Gaps:26/131 - (19%)


- Green bases have known domain annotations that are detailed below.


Human    73 QRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETVRLASSYIAHLANVLLLGD----S 133
            ||..||.|||.||||:|.||.:|:.:|||.|.| |||||:|::||:.||..|..:|...|    .
  Fly   363 QRVMANVRERQRTQSLNDAFKSLQQIIPTLPSD-KLSKIQTLKLATRYIDFLCRMLSSSDISLLK 426

Human   134 ADDGQPCFRAAGSAKGAVPAAADGGRQPRSICTFCLSNQRKGGGRRDLGGSCLKVRGVAPLRGPR 198
            |.:.|....|.|||...:.|||:                   |...||  .||:....||:..|.
  Fly   427 ALEAQGSPSAYGSASSLLSAAAN-------------------GAEADL--KCLRKANGAPIIPPE 470

Human   199 R 199
            :
  Fly   471 K 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TCF15NP_004600.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 25..67
bHLH_TS_TCF15_paraxis 66..131 CDD:381476 32/57 (56%)
twiNP_001033967.1 HLH 363..413 CDD:278439 30/50 (60%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165149627
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.