DRSC/TRiP Functional Genomics Resources

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Protein Alignment TCF15 and HLH4C

DIOPT Version :9

Sequence 1:NP_004600.3 Gene:TCF15 / 6939 HGNCID:11627 Length:199 Species:Homo sapiens
Sequence 2:NP_001259243.1 Gene:HLH4C / 31397 FlyBaseID:FBgn0011277 Length:191 Species:Drosophila melanogaster


Alignment Length:102 Identity:37/102 - (36%)
Similarity:54/102 - (52%) Gaps:24/102 - (23%)


- Green bases have known domain annotations that are detailed below.


Human    71 VRQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETVRLASSYIAHLANVLLLGDSAD 135
            ::.|.|...|||.|.::.|.:|..||.|:||.|.|:||||||.::||..|||:|.:||   ::. 
  Fly   107 LKYRTAHATRERIRVEAFNVSFAELRKLLPTLPPDKKLSKIEILKLAICYIAYLNHVL---ETPX 168

Human   136 DGQPCFRAAGSAKGAVPAAADGGRQPRSICTFCLSNQ 172
            |      :||::               |..|.||.|:
  Fly   169 D------SAGAS---------------SFATSCLFNE 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TCF15NP_004600.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 25..67
bHLH_TS_TCF15_paraxis 66..131 CDD:381476 29/59 (49%)
HLH4CNP_001259243.1 HLH 108..165 CDD:238036 29/59 (49%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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