Sequence 1: | NP_663730.1 | Gene: | Ppp1r42 / 69312 | MGIID: | 1921138 | Length: | 357 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_724335.2 | Gene: | dtr / 318856 | FlyBaseID: | FBgn0023090 | Length: | 1483 | Species: | Drosophila melanogaster |
Alignment Length: | 383 | Identity: | 103/383 - (26%) |
---|---|---|---|
Similarity: | 161/383 - (42%) | Gaps: | 83/383 - (21%) |
- Green bases have known domain annotations that are detailed below.
Mouse 12 NSNLK---------PR------KEETLAQC--LKKITHINFSDRNIDSIDDLSLCRNLSVLYLYD 59
Mouse 60 NRISQVTNLNYTTNLTHLYLQNNCISCIENLSSLKKLEKLYLGGNYIAVIEGLEGLEELRELHVE 124
Mouse 125 SQRLPLGEKLLFDPRTLRSL--AKSLSTLNISNNNIDDIKDLEILENLNHLIAVDNQLMHVKDLE 187
Mouse 188 LLLKKLMKLWKMDLNGNPVCLK-PKYRDKLILTSKSLEFLDGKEIKDMERQFLMNWKAS------ 245
Mouse 246 KDAKKISKKRRSRSEDASNSYISNFETVHHIVPVYYPQVGKPKVIFFSDVQRYLVHGNASSKCSQ 310
Mouse 311 ED------------KTTITEDIGNLSLKESESSLTKNDIHEPHLLQNPKVKENLSEKK 356 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ppp1r42 | NP_663730.1 | LRR 1 | 29..50 | 2/20 (10%) | |
leucine-rich repeat | 31..51 | CDD:275380 | 2/19 (11%) | ||
LRR_8 | 50..106 | CDD:290566 | 22/55 (40%) | ||
LRR 2 | 51..72 | 7/20 (35%) | |||
LRR_4 | 72..>106 | CDD:289563 | 15/33 (45%) | ||
LRR 3 | 73..94 | 11/20 (55%) | |||
leucine-rich repeat | 74..95 | CDD:275380 | 11/20 (55%) | ||
LRR 4 | 95..116 | 7/20 (35%) | |||
leucine-rich repeat | 96..147 | CDD:275380 | 14/52 (27%) | ||
LRR 5 | 117..138 | 4/20 (20%) | |||
LRR 6 | 147..168 | 11/20 (55%) | |||
leucine-rich repeat | 148..169 | CDD:275380 | 11/20 (55%) | ||
LRR 7 | 169..190 | 1/20 (5%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 329..357 | 9/28 (32%) | |||
dtr | NP_724335.2 | leucine-rich repeat | 38..57 | CDD:275380 | 2/20 (10%) |
LRR_8 | 56..112 | CDD:290566 | 22/55 (40%) | ||
LRR_4 | 56..98 | CDD:289563 | 18/41 (44%) | ||
LRR_RI | 58..>184 | CDD:238064 | 50/153 (33%) | ||
leucine-rich repeat | 58..79 | CDD:275380 | 7/20 (35%) | ||
leucine-rich repeat | 80..101 | CDD:275380 | 11/20 (55%) | ||
LRR_8 | 100..161 | CDD:290566 | 21/65 (32%) | ||
leucine-rich repeat | 102..125 | CDD:275380 | 8/23 (35%) | ||
leucine-rich repeat | 126..147 | CDD:275380 | 6/24 (25%) | ||
leucine-rich repeat | 151..175 | CDD:275380 | 12/40 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
2 | 1.870 |