DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TBX3 and Tbx3

DIOPT Version :10

Sequence 1:NP_057653.3 Gene:TBX3 / 6926 HGNCID:11602 Length:743 Species:Homo sapiens
Sequence 2:NP_853669.1 Gene:Tbx3 / 353305 RGDID:735203 Length:743 Species:Rattus norvegicus


Alignment Length:745 Identity:701/745 - (94%)
Similarity:713/745 - (95%) Gaps:4/745 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSLSMRDPVIPGTSMAYHPFLPHRAPDFAMSAVLGHQPPFFPALTLPPNGAAALSLPGALAKPIM 65
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat     1 MSLSMRDPVIPGTSMAYHPFLPHRAPDFAMSAVLGHQPPFFPALTLPPNGAAALSLPGALAKPIM 65

Human    66 DQLVGAAETGIPFSSLGPQAHLRPLKTMEPEEEVEDDPKVHLEAKELWDQFHKRGTEMVITKSGR 130
            ||||||||||||||||||||||||||||||||:||||||||||||||||||||||||||||||||
  Rat    66 DQLVGAAETGIPFSSLGPQAHLRPLKTMEPEEDVEDDPKVHLEAKELWDQFHKRGTEMVITKSGR 130

Human   131 RMFPPFKVRCSGLDKKAKYILLMDIIAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGE 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   131 RMFPPFKVRCSGLDKKAKYILLMDIIAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGE 195

Human   196 QWMSKVVTFHKLKLTNNISDKHGFTLAFPSDHATWQGNYSFGTQTILNSMHKYQPRFHIVRANDI 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   196 QWMSKVVTFHKLKLTNNISDKHGFTLAFPSDHATWQGNYSFGTQTILNSMHKYQPRFHIVRANDI 260

Human   261 LKLPYSTFRTYLFPETEFIAVTAYQNDKITQLKIDNNPFAKGFRDTGNGRREKRKQLTLQSMRVF 325
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   261 LKLPYSTFRTYLFPETEFIAVTAYQNDKITQLKIDNNPFAKGFRDTGNGRREKRKQLTLQSMRVF 325

Human   326 DERHKKENGTSDESSSEQAAFNCFAQASSPAASTVGTSNLKDLCPSEGESDAEAESKEEHGPEAC 390
            |||||||.|||||||||||||||||||||||.|||||||||||||||.|||||||||||||||||
  Rat   326 DERHKKETGTSDESSSEQAAFNCFAQASSPAVSTVGTSNLKDLCPSEAESDAEAESKEEHGPEAC 390

Human   391 DAAKISTTTSEEPCRDKGSPAVKAHLFAAE--RPRDSGRLDKASPDSRHSPATISSSTRGLGAEE 453
            |.|||||||:|||.|||||||.:|.||.||  |.||:.|||||||||||||||||||||..||:|
  Rat   391 DTAKISTTTAEEPGRDKGSPATRAQLFPAEPSRARDTARLDKASPDSRHSPATISSSTRVPGADE 455

Human   454 RRSPVREGTAPAKVEEARALPGKEAFAPLTVQTDAAAAHLAQGPLPGLGFAPGLAGQQFFNGHPL 518
            .|||.|||...|||:||||||.|:|||||:|||| |.|||.||||||||||||||||||||||||
  Rat   456 HRSPGREGPVSAKVDEARALPAKDAFAPLSVQTD-ATAHLTQGPLPGLGFAPGLAGQQFFNGHPL 519

Human   519 FLHPSQFAMGGAFSSMAAAGMGPLLATVSGASTGVSGLDSTAMASAAAAQGLSGASAATLPFHLQ 583
            ||||.||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   520 FLHPGQFAMGGAFSSM-AAGMGPLLATVSGASTGVSGLDSTAMASAAAAQGLSGASAATLPFHLQ 583

Human   584 QHVLASQGLAMSPFGSLFPYPYTYMAAAAAASSAAASSSVHRHPFLNLNTMRPRLRYSPYSIPVP 648
            |||||||||||||||||||||||||||||||||||||||||||||||||:|||||||||||||||
  Rat   584 QHVLASQGLAMSPFGSLFPYPYTYMAAAAAASSAAASSSVHRHPFLNLNSMRPRLRYSPYSIPVP 648

Human   649 VPDGSSLLTTALPSMAAAAGPLDGKVAALAASPASVAVDSGSELNSRSSTLSSSSMSLSPKLCAE 713
            |||.||||.|||||||:||||||||.|.|||||||||||||||||||||||||.|:|||||||:|
  Rat   649 VPDSSSLLATALPSMASAAGPLDGKSAVLAASPASVAVDSGSELNSRSSTLSSGSVSLSPKLCSE 713

Human   714 KEAATSELQSIQRLVSGLEAKPDRSRSASP 743
            |||||||||||||||||||||||||.|.||
  Rat   714 KEAATSELQSIQRLVSGLEAKPDRSCSGSP 743

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBX3NP_057653.3 T-box_TBX2_3-like 104..305 CDD:410314 200/200 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 301..342 39/40 (98%)
TBX 323..403 CDD:432659 74/79 (94%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 358..465 88/108 (81%)
Transcription repression 544..695 144/150 (96%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 688..707 16/18 (89%)
Tbx3NP_853669.1 T-box_TBX2_3-like 101..305 CDD:410314 203/203 (100%)
TBX 323..404 CDD:432659 75/80 (94%)
DUF5585 336..>686 CDD:465521 314/351 (89%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 371..467 75/95 (79%)

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