DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TCF4 and Tcf4

DIOPT Version :10

Sequence 1:NP_001230155.2 Gene:TCF4 / 6925 HGNCID:11634 Length:773 Species:Homo sapiens
Sequence 2:NP_038713.1 Gene:Tcf4 / 21413 MGIID:98506 Length:670 Species:Mus musculus


Alignment Length:671 Identity:658/671 - (98%)
Similarity:663/671 - (98%) Gaps:1/671 - (0%)


- Green bases have known domain annotations that are detailed below.


Human   103 MHHQQRMAALGTDKELSDLLDFSAMFSPPVSSGKNGPTSLASGHFTGSNVEDRSSSGSWGNGGHP 167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Mouse     1 MHHQQRMAALGTDKELSDLLDFSAMFSPPVSSGKNGPTSLASGHFTGSNVEDRSSSGSWGTGGHP 65

Human   168 SPSRNYGDGTPYDHMTSRDLGSHDNLSPPFVNSRIQSKTERGSYSSYGRESNLQGCHQQSLLGGD 232
            |||||||||||||||||||||||||||||||||||||||||||||||||| |:||||||||||||
Mouse    66 SPSRNYGDGTPYDHMTSRDLGSHDNLSPPFVNSRIQSKTERGSYSSYGRE-NVQGCHQQSLLGGD 129

Human   233 MDMGNPGTLSPTKPGSQYYQYSSNNPRRRPLHSSAMEVQTKKVRKVPPGLPSSVYAPSASTADYN 297
            |||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Mouse   130 MDMGNPGTLSPTKPGSQYYQYSSNNARRRPLHSSAMEVQTKKVRKVPPGLPSSVYAPSASTADYN 194

Human   298 RDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGMLGNSSHIPQSSSYCSLHPH 362
            ||||||||||||.||||||||||||||||||||||||||||||.|||||||||||||||||||||
Mouse   195 RDSPGYPSSKPAASTFPSSFFMQDGHHSSDPWSSSSGMNQPGYGGMLGNSSHIPQSSSYCSLHPH 259

Human   363 ERLSYPSHSSADINSSLPPMSTFHRSGTNHYSTSSCTPPANGTDSIMANRGSGAAGSSQTGDALG 427
            |||||||||||||||||||||||||||||||||||||||||||||||||||:|||||||||||||
Mouse   260 ERLSYPSHSSADINSSLPPMSTFHRSGTNHYSTSSCTPPANGTDSIMANRGTGAAGSSQTGDALG 324

Human   428 KALASIYSPDHTNNSFSSNPSTPVGSPPSLSAGTAVWSRNGGQASSSPNYEGPLHSLQSRIEDRL 492
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   325 KALASIYSPDHTNNSFSSNPSTPVGSPPSLSAGTAVWSRNGGQASSSPNYEGPLHSLQSRIEDRL 389

Human   493 ERLDDAIHVLRNHAVGPSTAMPGGHGDMHGIIGPSHNGAMGGLGSGYGTGLLSANRHSLMVGTHR 557
            ||||||||||||||||||||:||||||||||:|||||||||.|||||||.||||||||||||.||
Mouse   390 ERLDDAIHVLRNHAVGPSTAVPGGHGDMHGIMGPSHNGAMGSLGSGYGTSLLSANRHSLMVGAHR 454

Human   558 EDGVALRGSHSLLPNQVPVPQLPVQSATSPDLNPPQDPYRGMPPGLQGQSVSSGSSEIKSDDEGD 622
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   455 EDGVALRGSHSLLPNQVPVPQLPVQSATSPDLNPPQDPYRGMPPGLQGQSVSSGSSEIKSDDEGD 519

Human   623 ENLQDTKSSEDKKLDDDKKDIKSITRSRSSNNDDEDLTPEQKAEREKERRMANNARERLRVRDIN 687
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   520 ENLQDTKSSEDKKLDDDKKDIKSITRSRSSNNDDEDLTPEQKAEREKERRMANNARERLRVRDIN 584

Human   688 EAFKELGRMVQLHLKSDKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSEPP 752
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   585 EAFKELGRMVQLHLKSDKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSEPP 649

Human   753 PLSLAGPHPGMGDASNHMGQM 773
            ||||||||||||||:||||||
Mouse   650 PLSLAGPHPGMGDAANHMGQM 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TCF4NP_001230155.2 bHLH_E-protein_TCF4_E2-2 664..748 CDD:381515 83/83 (100%)
Tcf4NP_038713.1 Essential for MYOD1 inhibition 1..83 80/81 (99%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..244 214/220 (97%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 262..320 56/57 (98%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 335..378 42/42 (100%)
Leucine-zipper 378..399 20/20 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 406..426 17/19 (89%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 465..573 107/107 (100%)
bHLH_E-protein_TCF4_E2-2 561..645 CDD:381515 83/83 (100%)
Class A specific domain 622..645 22/22 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 637..670 31/32 (97%)

Return to query results.
Submit another query.