DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TCF4 and tcf4

DIOPT Version :10

Sequence 1:NP_001230155.2 Gene:TCF4 / 6925 HGNCID:11634 Length:773 Species:Homo sapiens
Sequence 2:XP_031755521.1 Gene:tcf4 / 100124777 XenbaseID:XB-GENE-1011628 Length:705 Species:Xenopus tropicalis


Alignment Length:709 Identity:597/709 - (84%)
Similarity:629/709 - (88%) Gaps:42/709 - (5%)


- Green bases have known domain annotations that are detailed below.


Human   103 MHHQQRMAALGTDKELSDLLDFSAMFSPPVSSGKNGPTSLASGHFTGSNVEDRSSSGSWGNGGHP 167
            |:|.|||||||||||||||||||||||||||||||||||||||||:|:||||||:||||||..||
 Frog     1 MNHHQRMAALGTDKELSDLLDFSAMFSPPVSSGKNGPTSLASGHFSGTNVEDRSNSGSWGNSAHP 65

Human   168 SPSR--------------------NYGDGTPYDHMTSRDLG--SHDNLSPPFVNSRIQSKTERGS 210
            ||||                    :||:|..::|||||||.  |||||||||||:|||.|::|.|
 Frog    66 SPSRKLSCSVQASVHSHPPRRWLHSYGEGGHFEHMTSRDLSSHSHDNLSPPFVNTRIQGKSDRNS 130

Human   211 YSSYGRESNLQGCHQQSLLGGDMDMGNPGTLSPTKPGSQYYQYSSNNPRRRPLHSSAMEVQTKKV 275
            ||.|||:|.:|||||||||||||:|.|.|.|||||||||||.||||||||||.|.|:||||.|||
 Frog   131 YSCYGRDSEMQGCHQQSLLGGDMEMANTGALSPTKPGSQYYPYSSNNPRRRPFHGSSMEVQAKKV 195

Human   276 RKVPPGLPSSVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGY 340
            ||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||.||
 Frog   196 RKVPPGLPSSVYAPSASTADYNRDSPGYPSSKPAASTFPSSFFMQDGHHSSDPWSSSSGMNQAGY 260

Human   341 AGMLGNSSHIPQSSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHRSGTNHYSTSSCTPPANGT 405
            .||||||||||||||||:||||||||||||||.||||||||||||||||||||||||||||||||
 Frog   261 GGMLGNSSHIPQSSSYCNLHPHERLSYPSHSSTDINSSLPPMSTFHRSGTNHYSTSSCTPPANGT 325

Human   406 DSIMANRGSGAAGSSQTGDALGKALASIYSPDHTNNSFSSNPSTPVGSPPSLSAGTAVWSRNGGQ 470
            :|||.||||.|.||||||||||||||||||||||||||||||||||||||||||.||||||||||
 Frog   326 ESIMTNRGSAATGSSQTGDALGKALASIYSPDHTNNSFSSNPSTPVGSPPSLSASTAVWSRNGGQ 390

Human   471 ASSSPNYEGPLHSL--QSRIEDRLERLDDAIHVLRNHAVGPSTAMPGGHGDMHGIIGPSHNGAMG 533
            .|||||||||||:|  |||||||||||||||||||||||||||||||.|.::||:||||||||||
 Frog   391 TSSSPNYEGPLHTLTQQSRIEDRLERLDDAIHVLRNHAVGPSTAMPGSHSELHGLIGPSHNGAMG 455

Human   534 GLGSGYGTGLLSANRHSLMVGTHREDGVALRGSHSLLPNQVPVPQLPVQSATSPDLNPPQDPYRG 598
            |:|||||||||||||||||||.||||||.|||||||:||||.|||||||||||||||..||||||
 Frog   456 GIGSGYGTGLLSANRHSLMVGAHREDGVNLRGSHSLVPNQVSVPQLPVQSATSPDLNSDQDPYRG 520

Human   599 MPPGLQGQSVSSGSSEIKSDDEGDENLQDTKSSEDKKLDDDKKDIKSITRSRSSNNDDEDLTPEQ 663
            :|.|||.|:||.|||||||:|||||||.|:|||:||||||||||:||||    ||||||||||||
 Frog   521 IPTGLQAQAVSPGSSEIKSEDEGDENLHDSKSSDDKKLDDDKKDVKSIT----SNNDDEDLTPEQ 581

Human   664 KAEREKERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKLLILHQAVAVILSLEQQVR 728
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Frog   582 KAEREKERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKLLILHQAVAVILSLEQQVR 646

Human   729 --------------ERNLNPKAACLKRREEEKVSSEPPPLSLAGPHPGMGDASNHMGQM 773
                          |||||||||||||||||||||:|.||||||||||||||:||:|||
 Frog   647 GNPTLLSILDLLVLERNLNPKAACLKRREEEKVSSDPSPLSLAGPHPGMGDAANHLGQM 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TCF4NP_001230155.2 bHLH_E-protein_TCF4_E2-2 664..748 CDD:381515 83/97 (86%)
tcf4XP_031755521.1 bHLH_E-protein_TCF4_E2-2 582..680 CDD:381515 83/97 (86%)

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