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Protein Alignment Rhox13 and Drgx
DIOPT Version :9
Sequence 1: | XP_001077350.3 |
Gene: | Rhox13 / 691244 |
RGDID: | 1586264 |
Length: | 234 |
Species: | Rattus norvegicus |
Sequence 2: | NP_001097075.2 |
Gene: | Drgx / 5740176 |
FlyBaseID: | FBgn0085369 |
Length: | 587 |
Species: | Drosophila melanogaster |
Alignment Length: | 123 |
Identity: | 43/123 - (34%) |
Similarity: | 56/123 - (45%) |
Gaps: | 40/123 - (32%) |
- Green bases have known domain annotations that are detailed below.
Rat 117 LFVAAAAPPIAPAAAAIQIPGPHRSR-----------------------------RRRHRRHRRS 152
:|.....|.:.|. |||..| ||:.||:|.:
Fly 1 MFCYQCPPALHPC-------GPHPPRLPTLDYPFAATHPYTSYSYHPAIHDETFVRRKQRRNRTT 58
Rat 153 SPYLFTQWQVEEMENLFEETPYPDVLTRGELARTLNVPEVKVKVWFSNRRAKQRKNER 210
||..|:||:|..|.:|.||||.||.:||..:|:.|.:|:|||.|||||.||.||
Fly 59 ----FTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWRKAER 112
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Rhox13 | XP_001077350.3 |
Homeobox |
157..206 |
CDD:278475 |
27/48 (56%) |
Drgx | NP_001097075.2 |
Homeobox |
56..108 |
CDD:278475 |
28/55 (51%) |
OAR |
428..445 |
CDD:281777 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000011 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.910 |
|
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