DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TBX6 and bi

DIOPT Version :9

Sequence 1:NP_004599.2 Gene:TBX6 / 6911 HGNCID:11605 Length:436 Species:Homo sapiens
Sequence 2:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster


Alignment Length:502 Identity:172/502 - (34%)
Similarity:229/502 - (45%) Gaps:118/502 - (23%)


- Green bases have known domain annotations that are detailed below.


Human     3 HPRELYPSLGAGYRLGPAQPGADSSFPPALAEGYRYPELDTPKLDCFLSGMEAAPRTLAAHPPLP 67
            || .|||  |.|.|..|..|||   .|.|...|..|    |...|..|:       :..||...|
  Fly   262 HP-GLYP--GGGLRFPPHHPGA---HPHAHHLGSAY----TTAEDVVLA-------SAVAHQLHP 309

Human    68 LLPPAMGTEPAPSAPEALHSLPGV----SLSLENRELWKEFSSVGTEMIITKAGRRMFPACRVSV 128
            .:.|....:|...         ||    .::||.::||::|..:||||:|||:||:|||..:..|
  Fly   310 AMRPLRALQPEDD---------GVVDDPKVTLEGKDLWEKFHKLGTEMVITKSGRQMFPQMKFRV 365

Human   129 TGLDPEARYLFLLDVIPVDGARYRWQGRRWEPSGKAEPRLPDRVYIHPDSPATGAHWMRQPVSFH 193
            :|||.:|:|:.|||::..|..||::...||..:|||:|.:|.|:|||||||.||..||::.||||
  Fly   366 SGLDAKAKYILLLDIVAADDYRYKFHNSRWMVAGKADPEMPKRMYIHPDSPTTGEQWMQKVVSFH 430

Human   194 RVKLTNSTLDPHGHL---ILHSMHKYQPRIHLVRAAQLCSQHWGGMASFRFPETTFISVTAYQNP 255
            ::||||:..|.||.:   ||:||||||||.|||||..:....:....::.|.||.||:||||||.
  Fly   431 KLKLTNNISDKHGFVSTTILNSMHKYQPRFHLVRANDILKLPYSTFRTYVFKETEFIAVTAYQNE 495

Human   256 QITQLKIAANPFAKGFRENGRNCKRERDARVKRKLRGPEPAATEAYGSGDTP------GGP---- 310
            :||||||..||||||||:.|...:.::.|.:..:....:........|...|      |.|    
  Fly   496 KITQLKIDNNPFAKGFRDTGAGKREKKQALMSNRGSDSDKLNPTHVSSSRAPLHLGHAGRPPHLH 560

Human   311 -----CDSTLGGDIRESD---PEQAP------------APGEATAAPA---PLCG-GPSAEAYLL 351
                 .|:....|.:..|   |.|:|            |...:.|..|   .|.| |..|..:..
  Fly   561 PHAALLDNQQDDDDKLLDVVGPPQSPLLPLSHSLQQMHAHQHSAALAAWFNHLAGAGAGASEHAA 625

Human   352 HPAAFHGAPSHL--------------------------------PTRSPSFPEAPDSGRSAPYSA 384
            ..||...|...|                                ||.:.|..||  .|.:|..:|
  Fly   626 AAAANASAEDALRRRLQADADVERDGSDSSCSESVGGSTGGAFRPTSTGSPKEA--VGAAAAAAA 688

Human   385 AFLELPHGSGGSGYPA-----APPAVPFAPHFLQGGPFPLPYTAPGG 426
            |.|    ..||..||:     .||..| :||.       |||..|.|
  Fly   689 AGL----NPGGGSYPSPNISVGPPIHP-SPHL-------LPYLYPHG 723

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBX6NP_004599.2 TBOX 90..277 CDD:238106 102/193 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 271..339 17/100 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 360..379 7/50 (14%)
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988 23/72 (32%)
T-box 330..513 CDD:279278 98/182 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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