DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBX6 and tbx-8

DIOPT Version :9

Sequence 1:NP_004599.2 Gene:TBX6 / 6911 HGNCID:11605 Length:436 Species:Homo sapiens
Sequence 2:NP_499287.2 Gene:tbx-8 / 176450 WormBaseID:WBGene00006545 Length:315 Species:Caenorhabditis elegans


Alignment Length:350 Identity:109/350 - (31%)
Similarity:141/350 - (40%) Gaps:83/350 - (23%)


- Green bases have known domain annotations that are detailed below.


Human    91 VSLSLENRELWKEFSSVGTEMIITKAGRRMFPACRVSVTGLDPEARYLFLLDVIPVDGARYRWQG 155
            |:|..:..:||..|.....|||:||:||:|||.....|.||.|...|..:|.:.|.|..||::..
 Worm     7 VTLREDQDKLWNLFHYHKNEMIVTKSGRKMFPKLEYVVRGLTPNKLYAMMLHIEPSDDHRYKFSS 71

Human   156 RRWEPSGKAEP-RLPDRVYIHPDSPATGAHWMRQPVSFHRVKLTNSTLDPHGHLI-LHSMHKY-- 216
            ..|..|||||. |.|.::: |.|...:|..||..||.|.|||:||.....:..:| |||||||  
 Worm    72 GEWVKSGKAEKHREPKKLW-HADGVRSGKEWMTNPVCFDRVKITNCAESTNASMIFLHSMHKYTP 135

Human   217 ----------------QPRIHLVRAAQLCSQHWGGMASFRFPETTFISVTAYQNPQITQLKIAAN 265
                            ||...||             .|.|...|.||:||||||..:.:|||..|
 Worm   136 VMSIYESPSESPFSVPQPSTRLV-------------TSVRLTYTEFIAVTAYQNDAVIKLKIKFN 187

Human   266 PFAKGFRENGRNCKRERDARVKRKLRGPEPAATEAYGSGDTPGGPCDSTLGGDIRESDPEQAPAP 330
            |||||||| |....|:|::          |:|.::            :|.....:.|.|:  |..
 Worm   188 PFAKGFRE-GSQSDRKRNS----------PSADDS------------TTDESSSQVSSPQ--PKK 227

Human   331 GEATAAPAPLCGGPSAEAYLLHPAAFHGAPSHLPTRSPSFPEAPDSGRSAPYSAAFLELPHGSGG 395
            ....:...||                  .|..|||..|..|.......|.||      ..|.:..
 Worm   228 SRTVSVSPPL------------------MPRILPTMIPPPPAINPLFYSLPY------FSHLAAT 268

Human   396 SGYPAAPPAVPFAPHFLQGGPFPLP 420
            ..:|..|...||.........||.|
 Worm   269 GNFPPVPFQFPFGLPCFSPMSFPTP 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBX6NP_004599.2 TBOX 90..277 CDD:238106 82/205 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 271..339 12/67 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 360..379 6/18 (33%)
tbx-8NP_499287.2 TBOX 4..199 CDD:238106 82/206 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C161449135
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.840

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