DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TBX5 and bi

DIOPT Version :9

Sequence 1:XP_016875401.1 Gene:TBX5 / 6910 HGNCID:11604 Length:534 Species:Homo sapiens
Sequence 2:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster


Alignment Length:548 Identity:184/548 - (33%)
Similarity:250/548 - (45%) Gaps:135/548 - (24%)


- Green bases have known domain annotations that are detailed below.


Human    44 PESALGAPSKSPSSPQ--------------------------AAFT------------------- 63
            |.:||.|.:.||:.|.                          :|:|                   
  Fly   247 PAAALAALAGSPAGPHPGLYPGGGLRFPPHHPGAHPHAHHLGSAYTTAEDVVLASAVAHQLHPAM 311

Human    64 ------QQGMEGI----KVFLHERELWLKFHEVGTEMIITKAGRRMFPSYKVKVTGLNPKTKYIL 118
                  |...:|:    ||.|..::||.|||::||||:|||:||:|||..|.:|:||:.|.||||
  Fly   312 RPLRALQPEDDGVVDDPKVTLEGKDLWEKFHKLGTEMVITKSGRQMFPQMKFRVSGLDAKAKYIL 376

Human   119 LMDIVPADDHRYKFADNKWSVTGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDP 183
            |:|||.|||:||||.:::|.|.|||:|.||.|:|:|||||.||..||:::|||.|||||||..|.
  Fly   377 LLDIVAADDYRYKFHNSRWMVAGKADPEMPKRMYIHPDSPTTGEQWMQKVVSFHKLKLTNNISDK 441

Human   184 FGHI---ILNSMHKYQPRLHIVKADENNGFGSKNTAFCTHVFPETAFIAVTSYQNHKITQLKIEN 245
            .|.:   |||||||||||.|:|:|  |:......:.|.|:||.||.|||||:|||.|||||||:|
  Fly   442 HGFVSTTILNSMHKYQPRFHLVRA--NDILKLPYSTFRTYVFKETEFIAVTAYQNEKITQLKIDN 504

Human   246 NPFAKGFR----GSDDMELHRMSRMQSKEYPVVPR--STVRQKVASNHS---PFSSESRALSTSS 301
            ||||||||    |..:.:...||...|....:.|.  |:.|..:...|:   |......||    
  Fly   505 NPFAKGFRDTGAGKREKKQALMSNRGSDSDKLNPTHVSSSRAPLHLGHAGRPPHLHPHAAL---- 565

Human   302 NLGSQYQCENGVSGPSQDLLPPPNPYPLPQEHS-QIYHCTKRKEEECSTTDH--------PYKKP 357
             |.:|...::.:    .|::.||....||..|| |..|..:......:..:|        .....
  Fly   566 -LDNQQDDDDKL----LDVVGPPQSPLLPLSHSLQQMHAHQHSAALAAWFNHLAGAGAGASEHAA 625

Human   358 YMETSPSEEDSFYR--------------SSYPQQQG--LGASYRTESAQRQACMYASSAPPSEPV 406
            ....:.|.||:..|              ||..:..|  .|.::|.          .|:..|.|.|
  Fly   626 AAAANASAEDALRRRLQADADVERDGSDSSCSESVGGSTGGAFRP----------TSTGSPKEAV 680

Human   407 -PSLEDISCNTWPSMPSYSSCTVTTVQPMDRLPYQHFSAHFTSGPLVPRLAGMANHGSPQLGEGM 470
             .:....:....|...||.|..::...|:      |.|.|     |:|.|.....:..|.||   
  Fly   681 GAAAAAAAAGLNPGGGSYPSPNISVGPPI------HPSPH-----LLPYLYPHGLYPPPHLG--- 731

Human   471 FQHQTSVAHQPVVRQCGPQTGLQSPGTL 498
                  :.|.|.........|| :||.|
  Fly   732 ------LLHNPAAAAAMSPAGL-NPGLL 752

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBX5XP_016875401.1 TBOX 69..257 CDD:238106 118/198 (60%)
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988 3/57 (5%)
T-box 330..513 CDD:279278 114/184 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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