DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TBX2 and Doc1

DIOPT Version :9

Sequence 1:NP_005985.3 Gene:TBX2 / 6909 HGNCID:11597 Length:712 Species:Homo sapiens
Sequence 2:NP_648283.1 Gene:Doc1 / 39039 FlyBaseID:FBgn0028789 Length:391 Species:Drosophila melanogaster


Alignment Length:336 Identity:150/336 - (44%)
Similarity:198/336 - (58%) Gaps:59/336 - (17%)


- Green bases have known domain annotations that are detailed below.


Human   109 LEAKELWDQFHKLGTEMVITKSGRRMFPPFKVRVSGLDKKAKYILLMDIVAADDCRYKFHNSRWM 173
            ||..:||.||||:||||:||||||||||..:|.:|||:::|.|.:|:::|...||||||..|:|:
  Fly    63 LENNDLWQQFHKIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFSGSQWV 127

Human   174 VAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVR 238
            .||.|:|:.|:|||:||||||||..|.::.:.|:|:|||||..|..|..:|.||||||||.||:|
  Fly   128 PAGGAEPQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSSGHIVLASMHKYQPRLHIIR 192

Human   239 ANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQLKIDNNPFAKGFRDTGNGRREKRK-----Q 298
            ::::.:||::..:.:|||||:|:||||||||:||:|||||||||||||::|..|. |||     .
  Fly   193 SSELTQLPWAPQQAFVFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRESGQSRC-KRKLNSSGN 256

Human   299 LTLPSLRLYEEHCKPERDGAESDASSCDPP------------------PAREPPTSPGAAP-SP- 343
            .||.|          |.||  |..||||.|                  ||....|.|.|.| || 
  Fly   257 STLES----------EDDG--SSVSSCDSPQAKRQRQDFEQDSTGSVSPAYYGATHPVANPMSPY 309

Human   344 LRLHRARAEEKSCAADSDPE----------PERLSEERAG--------APLGRSPAPDSASPTRL 390
            ||.|.:..  .|.||...|.          |:.|....|.        :|:...|. .|::||..
  Fly   310 LRHHLSYG--PSGAAGLPPSIAAAYFGGVPPQILPMPPATYAPTVAPVSPVASQPV-GSSTPTTS 371

Human   391 TEPERARERRS 401
            ..|..:.:|.|
  Fly   372 PRPSTSTKRNS 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBX2NP_005985.3 T-box_TBX2_3-like 103..287 CDD:410314 106/177 (60%)
PHA03307 300..>467 CDD:223039 38/140 (27%)
TBX 305..383 CDD:403708 29/115 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 313..450 35/127 (28%)
Repression domain 1 (RD1) 518..601
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 637..687
Doc1NP_648283.1 TBOX 58..245 CDD:238106 108/181 (60%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2837
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.840

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