DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TBX2 and Doc2

DIOPT Version :9

Sequence 1:NP_005985.3 Gene:TBX2 / 6909 HGNCID:11597 Length:712 Species:Homo sapiens
Sequence 2:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster


Alignment Length:449 Identity:157/449 - (34%)
Similarity:224/449 - (49%) Gaps:70/449 - (15%)


- Green bases have known domain annotations that are detailed below.


Human   106 KVTLEAKELWDQFHKLGTEMVITKSGRRMFPPFKVRVSGLDKKAKYILLMDIVAADDCRYKFHNS 170
            ::||:..:||.|||::||||:||||||||||..::.||||:.::.|.:|:::|...||||||..|
  Fly    57 EMTLQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLEMVPIGDCRYKFSGS 121

Human   171 RWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTNNISDKHGFTILNSMHKYQPRFH 235
            :|:.||.|:|:.|:|||:||||||||..|.|:|:.|:|:|||||..|..|..:|.||||||||.|
  Fly   122 QWVPAGGAEPQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNNTLDNSGHIVLASMHKYQPRLH 186

Human   236 IVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKITQLKIDNNPFAKGFRDTGNGRREKRKQLT 300
            ::|..|:.::|::..:.:||.||:|:||||||||:||:|||||||||||||:||..|. |||..:
  Fly   187 VIRTADLAQIPWAPQQAFVFAETEFVAVTAYQNDRITKLKIDNNPFAKGFRETGQS
RC-KRKMSS 250

Human   301 LPSLRLYEEHCKPERDGAESDASSCDPPPAREPPTSPGAAPSPLRLHRARAEEKSCAADSD-PEP 364
            .|:             |.:.|.|    |......:...:..||.:.....|...|...||| |:.
  Fly   251 SPT-------------GEDQDQS----PSLSHSQSQSESDMSPTKGGGETAGGTSSIGDSDGPQI 298

Human   365 ERLSEERAGAPLGRS----PAPDSASPTRLTEPERARERRSPERGKEPAESGGDGPFGLRSLEKE 425
            :||....:...|..|    ..|.::|....:.|........|    .|.::.......::..::.
  Fly   299 KRLRSNGSACSLSSSLDDQSVPGASSLALGSPPPHLHSHSHP----HPLQARSASSVFMQHFQQN 359

Human   426 RAEARRKD--------EGRKEAAEGKEQGLAPLVVQTDSASPL---------GAGHLPGLAFSSH 473
            .....|..        .||.....|..|           |||:         |.|..|||.....
  Fly   360 MQSLLRPSLVDLACTYFGRPHEYGGAIQ-----------ASPMYPPAAMLQAGLGPHPGLNLPPG 413

Human   474 LHGQQFFGPLGAGQPLFLHPGQFTM------------GPGAFSAMGMGHLLASVAGGGN 520
            :.|..........:.|.|..|..|.            .|   |....|..::::.|||:
  Fly   414 VSGADLISDESGAEELELDVGSETSTLEQSTQEQPLEQP---STRSKGFSISAILGGGS 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBX2NP_005985.3 T-box_TBX2_3-like 103..287 CDD:410314 104/180 (58%)
PHA03307 300..>467 CDD:223039 32/188 (17%)
TBX 305..383 CDD:403708 16/82 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 313..450 26/149 (17%)
Repression domain 1 (RD1) 518..601 2/3 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 637..687
Doc2NP_648282.1 TBOX 55..242 CDD:238106 107/184 (58%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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