DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TBX2 and Tbx2

DIOPT Version :10

Sequence 1:NP_005985.3 Gene:TBX2 / 6909 HGNCID:11597 Length:712 Species:Homo sapiens
Sequence 2:NP_001388735.1 Gene:Tbx2 / 303398 RGDID:1311014 Length:711 Species:Rattus norvegicus


Alignment Length:714 Identity:680/714 - (95%)
Similarity:686/714 - (96%) Gaps:5/714 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MREPALAASAMAYHPFHAPRPADFPMSAFLAAAQPSFFPALALPPGALAKPLPDPGLAGAAAAAA 65
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat     1 MREPALAASAMAYHPFHAPRPADFPMSAFLAAAQPSFFPALALPPGALAKPLPDPGLAGAAAAAA 65

Human    66 AAAAAAEAGLHVSALGPHPPAAHLRSLKSLEPEDEVEDDPKVTLEAKELWDQFHKLGTEMVITKS 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat    66 AAAAAAEAGLHVSALGPHPPAAHLRSLKSLEPEDEVEDDPKVTLEAKELWDQFHKLGTEMVITKS 130

Human   131 GRRMFPPFKVRVSGLDKKAKYILLMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPAT 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   131 GRRMFPPFKVRVSGLDKKAKYILLMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPAT 195

Human   196 GEQWMAKPVAFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYVFPETDF 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   196 GEQWMAKPVAFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRANDILKLPYSTFRTYVFPETDF 260

Human   261 IAVTAYQNDKITQLKIDNNPFAKGFRDTGNGRREKRKQLTLPSLRLYEEHCKPERDGAESDASSC 325
            ||||||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||||
  Rat   261 IAVTAYQNDKITQLKIDNNPFAKGFRDTGNGRREKRKQLTLPTLRLYEEHCKPERDGAESDASSC 325

Human   326 DPPPAREPPTSPGAAPSPLRLHRARAEEKSCAADSDPEPERLSEERAGAPLGRSPAPDSASPTRL 390
            |||||||||.||.||||||||||||||||.|||||||||||..||||.||||||.:.| |||.||
  Rat   326 DPPPAREPPPSPSAAPSPLRLHRARAEEKPCAADSDPEPERSGEERAAAPLGRSSSRD-ASPARL 389

Human   391 TEPERARERRSPERG-KEPAESGGDGPFGLRSLEKERAEARRKDEGRKEAAEGKEQGLAPLVVQT 454
            |||||:||||||||| |||.|.||||||.|||||||||||||||||||:..||||..||||||||
  Rat   390 TEPERSRERRSPERGSKEPTEGGGDGPFSLRSLEKERAEARRKDEGRKDVGEGKEPSLAPLVVQT 454

Human   455 DSASPLGAGHLPGLAFSSHLHGQQFFGPLGAGQPLFLHPGQFTMGPGAFSAMGMGHLLASVA-GG 518
            ||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||| ||
  Rat   455 DSASPLGAGHLPGLAFSSHLHGQQFFGPLGAGQPLFLHPGQFAMGPGAFSAMGMGHLLASVAGGG 519

Human   519 GNGGGGGPGTAAGLDAGGLGPAASAASTAAPFPFHLSQHMLASQGIPMPTFGGLFPYPYTYMAAA 583
            ||.||..||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
  Rat   520 GNSGGAAPGTAAGLDAGGLGPAASAASTATPFPFHLSQHMLASQGIPMPTFGGLFPYPYTYMAAA 584

Human   584 AAAASALPATSAAAAAAAAAGSLSRSPFLGSARPRLRFSPYQIPVTIPPSTSLLTTGLASEGSKA 648
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|.|| 
  Rat   585 AAAASALPATSAAAAAAAAAGSLSRSPFLGSARPRLRFSPYQIPVTIPPSTSLLTTGLAAESSK- 648

Human   649 AGGNSREPSPLPELALRKVGAPSRGALSPSGSAKEAANELQSIQRLVSGLESQRALSPGRESPK 712
             |||||||||||||||||||.||||||||||||||||:||||||||||||||||||||||||||
  Rat   649 -GGNSREPSPLPELALRKVGGPSRGALSPSGSAKEAASELQSIQRLVSGLESQRALSPGRESPK 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBX2NP_005985.3 T-box_TBX2_3-like 103..287 CDD:410314 183/183 (100%)
PHA03307 300..>467 CDD:223039 145/167 (87%)
TBX 305..383 CDD:432659 69/77 (90%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 313..450 116/137 (85%)
Repression domain 1 (RD1). /evidence=ECO:0000269|PubMed:11062467, ECO:0000269|PubMed:30599067 518..601 78/82 (95%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 637..687 44/49 (90%)
Tbx2NP_001388735.1 T-box_TBX2_3-like 103..287 CDD:410314 183/183 (100%)
TBX 305..379 CDD:432659 67/73 (92%)

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