DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2aj and His2A:CG33823

DIOPT Version :9

Sequence 1:NP_001103080.1 Gene:H2aj / 690795 RGDID:1592176 Length:129 Species:Rattus norvegicus
Sequence 2:NP_001027316.1 Gene:His2A:CG33823 / 3771783 FlyBaseID:FBgn0053823 Length:124 Species:Drosophila melanogaster


Alignment Length:124 Identity:112/124 - (90%)
Similarity:118/124 - (95%) Gaps:1/124 - (0%)


- Green bases have known domain annotations that are detailed below.


  Rat     1 MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILE 65
            |||||| ||||:.||||||:||||||||||:||||||||||||||||||||||||:|||.||:||
  Fly     1 MSGRGK-GGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLE 64

  Rat    66 LAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESQ 124
            |||||||||||||||||||||||||||||||||..||||||||||||||||||||||.:
  Fly    65 LAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2ajNP_001103080.1 PTZ00017 1..129 CDD:185399 112/124 (90%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22 16/20 (80%)
His2A:CG33823NP_001027316.1 PTZ00017 16..124 CDD:185399 99/108 (92%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 145 1.000 Domainoid score I4453
eggNOG 1 0.900 - - E1_COG5262
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 219 1.000 Inparanoid score I3480
OMA 1 1.010 - - QHG53554
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000046
OrthoInspector 1 1.000 - - mtm9107
orthoMCL 1 0.900 - - OOG6_100077
Panther 1 1.100 - - O PTHR23430
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X55
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.870

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