DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CNTN2 and cntn2

DIOPT Version :9

Sequence 1:XP_024305154.1 Gene:CNTN2 / 6900 HGNCID:2172 Length:1200 Species:Homo sapiens
Sequence 2:XP_031752703.1 Gene:cntn2 / 100487049 XenbaseID:XB-GENE-6070188 Length:1033 Species:Xenopus tropicalis


Alignment Length:991 Identity:640/991 - (64%)
Similarity:780/991 - (78%) Gaps:2/991 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    31 VVSSPAAWSSALGSQTTFGPVFEDQPLSVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKL 95
            |..|.:|...|....:.:|||||:||.:.|||:.|.||||.|.|||||||.|||||::||||:.|
 Frog    13 VFLSFSALKPAESFMSEYGPVFEEQPENTLFPDGSIEEQVTLPCRARASPSATYRWQLNGTELNL 77

Human    96 EPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKAHE 160
            .....::||||||.|..||:::.||.|||:||||.|||:|.||.||||:||||..|:||.||..|
 Frog    78 TADPSYRLVGGNLAISGPTQSKHAGTYQCIASNPKGTVLSSEASLRFGYLQEFPAEQRDTVKVTE 142

Human   161 GWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSH 225
            ||||||.||||.|||||||||||||||.|:.||.|.||||.|||||:|:|...|.|.||||.|||
 Frog   143 GWGVMLACNPPKHYPGLSYRWLLNEFPTFLNTDNRRFVSQVTGNLYVAQTVKEDEGAYSCLTTSH 207

Human   226 MDFSTKSVFSKFAQLNLAAE-DTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPRIKWRKV 289
            :.|:||||:|.|.|||:.:| ..|.:|||||.|||.|||||.||.|.|||||||||||.|:||||
 Frog   208 ISFTTKSVYSSFTQLNVNSEVKPRTYAPSIKVRFPGETYALYGQAVFLECFAFGNPVPHIRWRKV 272

Human   290 DGSLSPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIG 354
            ||:|.|:....:|.|..||::||::|||||||.||:|..|.|||:|||||||||.||:||||.||
 Frog   273 DGTLPPRLLVIDPVLHFPSITFEEDGTYECEAVNSEGSTTHQGRVIVQAQPEWLHVITDTEAKIG 337

Human   355 SNLRWGCAAAGKPRPTVRWLRNGEPLASQNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYA 419
            |:|.|.|||:||||||:||||:|:||.:|..:|:..|.::|:.|||.|||||||||||||||||.
 Frog   338 SDLLWSCAASGKPRPTIRWLRDGKPLMTQVNIEITNGQIKFTSLSLHDSGMYQCVAENKHGTIYT 402

Human   420 SAELAVQALAPDFRLNPVRRLIPAARGGEILIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDG 484
            :|||.||||||||||:||:||||||||||::|.|.|||||..::|||||||:|.||||||||.:|
 Frog   403 TAELTVQALAPDFRLSPVKRLIPAARGGEVIIQCNPRAAPTPLILWSKGTELLFNSSRVTVTANG 467

Human   485 TLIIRNISRSDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTLQCHASHDP 549
            |||:|||||||||||||||||.|||:||||:||||:|||||||||.:|||.||::||||||||||
 Frog   468 TLILRNISRSDEGKYTCFAENIMGKSNSTGVLSVREATKITLAPSGSDINQGDSITLQCHASHDP 532

Human   550 TMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEAT 614
            :|||||||||:..||||:|...:||||::.|.:|||.|:||||||.||||||||||||..|..|:
 Frog   533 SMDLTFTWTLNGIPIDFEKEAQNYRRTSMDEAVGDLHIINAQLRHAGKYTCMAQTVVDRTSAMAS 597

Human   615 VLVRGPPGPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIEGN 679
            :|:||||||||||||:.:|:|.:||||||||||||||::|.:|.|.|....|:..||:|..:|||
 Frog   598 LLIRGPPGPPGGVVVKYVGETMVQLSWSRGFDNHSPISRYVVQVREPLTEIWRSARTDPPTVEGN 662

Human   680 AETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGAPGELIVNW 744
            ||:|.|:||..|.||.||::||||||.|:||.||:.||||||||:||||.:.||||||.||.:||
 Frog   663 AESALVVGLNQWTDYLFRIVASNILGDGDPSAPSALIRTREAAPNVAPSEVGGGGGAPNELTINW 727

Human   745 TPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPGADAQYFVYSNESVRPYTPFEVKIRSYNRRGD 809
            ||:.|:|||||.|||:::|:|:....|.|.||||..:|.:||.|||:..||||:|||:.||::|:
 Frog   728 TPIGRQYQNGDDFGYIIAFKRKNENTWLTVRVPGGQSQQYVYRNESIAAYTPFDVKIQGYNKKGE 792

Human   810 GPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGILLGYEIRYWKAGDKEAAA 874
            ||.|....|||||||||:.|::|.|..:|||::.|.|.|| |.:.|:||||||||||..||||||
 Frog   793 GPFSRDTTVYSAEEEPRMFPSEVKATAISSSDIEVAWNPV-QTLKGVLLGYEIRYWKTSDKEAAA 856

Human   875 DRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPASPSANATTMKPPPRRPPGNISWTFSSS 939
            ||||:||:.|:|.|:.|.|:|.|:||||.||:|||||:||:.|.||.|.|..:.|.||.||.|..
 Frog   857 DRVRSAGMATTAHVTSLKPDTTYYVTVRVYNQAGTGPSSPATNVTTSKAPSSKLPENIKWTLSRK 921

Human   940 SLSIKWDPVVPFRNESAVTGYKMLYQNDLHLTPTLHLTGKNWIEIPVPEDIGHALVQIRTTGPGG 1004
            ||||||:|||..:|||:|||||:||:...|.||.|::|.|..||:|.||......:|:|.||.||
 Frog   922 SLSIKWNPVVALQNESSVTGYKILYRMSHHSTPILYVTSKTHIELPFPEGFSTVTIQLRATGKGG 986

Human  1005 DGIPAEVHIVRNGGAA 1020
            ||.||||||..:.|.:
 Frog   987 DGEPAEVHIPTDSGTS 1002

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNTN2XP_024305154.1 Ig 49..142 CDD:325142 58/92 (63%)
Ig2_Contactin-2-like 144..241 CDD:143204 67/96 (70%)
Ig 252..337 CDD:325142 56/84 (67%)
Ig4_Contactin-2-like 341..425 CDD:143205 57/83 (69%)
Ig5_Contactin 446..518 CDD:319278 55/71 (77%)
Ig6_Contactin-2 537..616 CDD:143262 54/78 (69%)
FN3 631..718 CDD:238020 50/86 (58%)
FN3 739..813 CDD:238020 41/73 (56%)
FN3 828..920 CDD:238020 55/91 (60%)
Atrophin-1 <1002..1197 CDD:331285 11/19 (58%)
cntn2XP_031752703.1 Ig 324..408 CDD:416386 57/83 (69%)
Ig strand A 324..327 CDD:409353 2/2 (100%)
Ig strand A' 331..335 CDD:409353 3/3 (100%)
Ig strand B 339..347 CDD:409353 4/7 (57%)
Ig strand C 353..358 CDD:409353 3/4 (75%)
Ig strand C' 360..363 CDD:409353 1/2 (50%)
Ig strand D 368..372 CDD:409353 1/3 (33%)
Ig strand E 374..379 CDD:409353 1/4 (25%)
Ig strand F 388..395 CDD:409353 6/6 (100%)
Ig strand G 399..408 CDD:409353 6/8 (75%)
Ig5_Contactin 413..501 CDD:409358 69/87 (79%)
Ig strand B 432..436 CDD:409358 1/3 (33%)
Ig strand C 445..449 CDD:409358 1/3 (33%)
Ig strand E 467..471 CDD:409358 3/3 (100%)
Ig strand F 481..486 CDD:409358 4/4 (100%)
Ig strand G 494..497 CDD:409358 2/2 (100%)
Ig 503..601 CDD:416386 68/97 (70%)
Ig strand A 503..509 CDD:409353 4/5 (80%)
Ig strand A' 512..517 CDD:409353 2/4 (50%)
Ig strand B 520..528 CDD:409353 5/7 (71%)
Ig strand C 537..541 CDD:409353 3/3 (100%)
Ig strand D 562..565 CDD:409353 1/2 (50%)
Ig strand E 566..570 CDD:409353 3/3 (100%)
Ig strand F 579..586 CDD:409353 6/6 (100%)
Ig strand G 593..597 CDD:409353 1/3 (33%)
FN3 615..696 CDD:238020 47/80 (59%)
FN3 709..802 CDD:238020 51/92 (55%)
FN3 812..902 CDD:238020 55/90 (61%)
FN3 911..997 CDD:238020 50/85 (59%)
Ig 30..126 CDD:416386 60/95 (63%)
Ig strand A 33..37 CDD:409353 3/3 (100%)
Ig strand A' 40..45 CDD:409353 2/4 (50%)
Ig strand B 51..59 CDD:409353 5/7 (71%)
Ig strand C 64..70 CDD:409353 5/5 (100%)
Ig strand C' 72..75 CDD:409353 2/2 (100%)
Ig strand D 82..86 CDD:409353 0/3 (0%)
Ig strand E 88..94 CDD:409353 4/5 (80%)
Ig strand F 101..110 CDD:409353 6/8 (75%)
Ig strand G 113..126 CDD:409353 9/12 (75%)
Ig 134..223 CDD:416386 62/88 (70%)
Ig strand A 136..141 CDD:409353 3/4 (75%)
Ig strand B 145..151 CDD:409353 4/5 (80%)
Ig strand C 159..165 CDD:409353 5/5 (100%)
Ig strand C' 170..172 CDD:409353 0/1 (0%)
Ig strand D 177..182 CDD:409353 3/4 (75%)
Ig strand E 185..189 CDD:409353 3/3 (100%)
Ig strand F 199..207 CDD:409353 5/7 (71%)
Ig strand G 209..223 CDD:409353 8/13 (62%)
Ig 235..320 CDD:416386 56/84 (67%)
Ig strand A 235..240 CDD:409353 4/4 (100%)
Ig strand A' 243..248 CDD:409353 3/4 (75%)
Ig strand B 251..260 CDD:409353 6/8 (75%)
Ig strand C 266..270 CDD:409353 1/3 (33%)
Ig strand C' 273..275 CDD:409353 1/1 (100%)
Ig strand D 281..284 CDD:409353 0/2 (0%)
Ig strand E 285..290 CDD:409353 2/4 (50%)
Ig strand F 298..306 CDD:409353 7/7 (100%)
Ig strand G 309..320 CDD:409353 6/10 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 175 1.000 Domainoid score I18066
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H3720
Inparanoid 1 1.050 1377 1.000 Inparanoid score I1713
NCBI 1 1.000 - -
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D292460at33208
OrthoFinder 1 1.000 - - FOG0000550
OrthoInspector 1 1.000 - - oto158557
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8584
SonicParanoid 1 1.000 - - X342
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1010.090

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