DRSC/TRiP Functional Genomics Resources

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Protein Alignment TBX1 and tbx1

DIOPT Version :9

Sequence 1:XP_016884414.1 Gene:TBX1 / 6899 HGNCID:11592 Length:545 Species:Homo sapiens
Sequence 2:XP_005168668.1 Gene:tbx1 / 368206 ZFINID:ZDB-GENE-030805-5 Length:519 Species:Danio rerio


Alignment Length:573 Identity:353/573 - (61%)
Similarity:408/573 - (71%) Gaps:82/573 - (14%)


- Green bases have known domain annotations that are detailed below.


Human     1 MDARSPLSPRASAFSIASLVAA--EAAERTAHQGSGSSDRVKL----RWLPGSPAGMHFSTVTRD 59
            ||..|||||:|:|||||.|::|  :|...|..:.:.|.|:..:    |::.     ||:|||||:
Zfish     1 MDDSSPLSPKANAFSIACLISARDQAGNTTFDKHATSLDKQAVQNCSRYIK-----MHYSTVTRE 60

Human    60 ME-----------------AFTASSLSSLGAAGGFPGAASPGADPYGPREPPPPPPRYDPCAAAA 107
            ||                 |||.||||||...|.:..:.||| |||...|     .:::||.|| 
Zfish    61 MEAISSPWLTQLSHFCDVAAFTTSSLSSLNTPGSYHLSPSPG-DPYSHHE-----SQFEPCPAA- 118

Human   108 PGAPGPPPPPHAYPFAPAAGAATSAAAEPEGPGASCAAAAKAP----VKKNAKVAGVSVQLEMKA 168
                     .|||.::.:..|...|..:......|.::::..|    ||||.|||.::|||||||
Zfish   119 ---------QHAYNYSGSNSAQAPAQGDSGTSNCSSSSSSSTPNKTLVKKNPKVANINVQLEMKA 174

Human   169 LWDEFNQLGTEMIVTKAGRRMFPTFQVKLFGMDPMADYMLLMDFVPVDDKRYRYAFHSSSWLVAG 233
            ||||||||||||||||||||||||||||:|||||||||||||||:||||||||||||||||||||
Zfish   175 LWDEFNQLGTEMIVTKAGRRMFPTFQVKIFGMDPMADYMLLMDFLPVDDKRYRYAFHSSSWLVAG 239

Human   234 KADPATPGRVHYHPDSPAKGAQWMKQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRFHVVYVDP 298
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish   240 KADPATPGRVHYHPDSPAKGAQWMKQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRFHVVYVDP 304

Human   299 RKDSEKYAEENFKTFVFEETRFTAVTAYQNHRITQLKIASNPFAKGFRDCDPEDWPRNHRPGALP 363
            |||||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||:|.
Zfish   305 RKDSEKYAEENYKTFVFEETRFTAVTAYQNHRITQLKIASNPFAKGFRDCDPEDWPRNHRPGSLQ 369

Human   364 LMSAFARSRNPVASPTQPSGTEKDAAEARREFQRDAGGPAVLGDPAHPPQLLARVLSPSLPGAGG 428
            :||||||:|||::||.|.:||||:  ::|||:.||..|..:..||.|  ||::|||||:||..||
Zfish   370 IMSAFARTRNPMSSPPQQNGTEKE--DSRREYDRDPSGNPLHSDPTH--QLMSRVLSPALPVLGG 430

Human   429 AGGLVPLPGAPGGRPSPPNPELRLEA-PGASEPLHHHPYKYPAAAYDHYLGAKSRPAPYPLPGLR 492
            ... |||...|   .|||: ||||:. |...:.||||||||| |.|:||||||:||:|||.|.:|
Zfish   431 LHA-VPLTAGP---RSPPH-ELRLDGHPQPPDTLHHHPYKYP-ATYEHYLGAKTRPSPYPSPSIR 489

Human   493 GHGYHPHAHPHHHHHPVSPAAAAAAAAAAAAAAANMYSSAGAAPPGSYDYCPR 545
            |||||||.:|                     ..|||||:..|  |.:|||.||
Zfish   490 GHGYHPHMNP---------------------TTANMYSATSA--PTNYDYGPR 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBX1XP_016884414.1 None
tbx1XP_005168668.1 TBOX 165..355 CDD:238106 183/189 (97%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C194341794
Domainoid 1 1.000 385 1.000 Domainoid score I4990
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7966
Inparanoid 1 1.050 500 1.000 Inparanoid score I6493
NCBI 1 1.000 - -
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1185429at2759
OrthoFinder 1 1.000 - - FOG0003320
OrthoInspector 1 1.000 - - oto45494
orthoMCL 1 0.900 - - OOG6_107409
Panther 1 1.100 - - LDO PTHR11267
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2837
SonicParanoid 1 1.000 - - X3735
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 1 1.500 - -
1818.290

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