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Protein Alignment Tcf23 and Fer1
DIOPT Version :9
Sequence 1: | XP_001067558.2 |
Gene: | Tcf23 / 688600 |
RGDID: | 1586500 |
Length: | 215 |
Species: | Rattus norvegicus |
Sequence 2: | NP_001262334.1 |
Gene: | Fer1 / 2768661 |
FlyBaseID: | FBgn0037475 |
Length: | 256 |
Species: | Drosophila melanogaster |
Alignment Length: | 122 |
Identity: | 41/122 - (33%) |
Similarity: | 63/122 - (51%) |
Gaps: | 17/122 - (13%) |
- Green bases have known domain annotations that are detailed below.
Rat 53 SRVTSAPRRTR-ARGTAHGRSEASPENAARERTRVKTLRQAFLALQAALPAVPPDTKLSKLDVLV 116
||.:..|||.: |...|..|..|: .|||.|::::.:||..|:..:|.:|.:.:|||:|.|.
Fly 69 SRRSHKPRRLKCASQMAQQRQAAN----LRERRRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLK 129
Rat 117 LATSYIAHLTRTL-----GHELPGPAWPPFLRGLRYLHPLKKWPMRSRLYAGGLGCS 168
||.|||..|:..: |:| ||.: |:......|.||..::.| .||:..|
Fly 130 LAISYITFLSEMVKKDKNGNE-PGLS----LQRNYQKEPPKKIILKDR--TGGVAHS 179
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Tcf23 | XP_001067558.2 |
HLH |
80..129 |
CDD:197674 |
20/48 (42%) |
Fer1 | NP_001262334.1 |
HLH |
92..144 |
CDD:197674 |
20/55 (36%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4029 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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