DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TACR1 and Lkr

DIOPT Version :10

Sequence 1:NP_001049.1 Gene:TACR1 / 6869 HGNCID:11526 Length:407 Species:Homo sapiens
Sequence 2:NP_647968.3 Gene:Lkr / 38622 FlyBaseID:FBgn0035610 Length:542 Species:Drosophila melanogaster


Alignment Length:316 Identity:102/316 - (32%)
Similarity:160/316 - (50%) Gaps:24/316 - (7%)


- Green bases have known domain annotations that are detailed below.


Human    25 FVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVN 89
            :..||..:.|.:..|..|.:.:|:||.:|:|::...::||||||.::.|||||:..:..|.....
  Fly    28 YAAPAEIVALLSIFYGGISIVAVIGNTLVIWVVATTRQMRTVTNMYIANLAFADVIIGLFCIPFQ 92

Human    90 FTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRLSATATKVVICVI 154
            |..|:...|....|.|.|..|....:|..|::::||:|.||:.|||:||:.|.:...:|.:|..|
  Fly    93 FQAALLQSWNLPWFMCSFCPFVQALSVNVSVFTLTAIAIDRHRAIINPLRARPTKFVSKFIIGGI 157

Human   155 WVLALLLAFPQGYYSTTETMPSRVVCMIEWPEHPNKIYEKVYHICVT---------------VLI 204
            |:||||.|.|.......|.:..|.       ...|:.|......|:.               |.:
  Fly   158 WMLALLFAVPFAIAFRVEELTERF-------RENNETYNVTRPFCMNKNLSDDQLQSFRYTLVFV 215

Human   205 -YFLPLLVIGYAYTVVGITLWASEIPGDSSD-RYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIF 267
             |.:|..||.:.|..:.:.||.:..||::.| |....:..|:||:||:|:||..|.:||||..::
  Fly   216 QYLVPFCVISFVYIQMAVRLWGTRAPGNAQDSRDITLLKNKKKVIKMLIIVVIIFGLCWLPLQLY 280

Human   268 FLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCC 323
            .:|....|::....||..|:....|||||::.|||.||...|::|:..|...|..|
  Fly   281 NILYVTIPEINDYHFISIVWFCCDWLAMSNSCYNPFIYGIYNEKFKREFNKRFAAC 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TACR1NP_001049.1 7tmA_NK1R 33..316 CDD:320668 97/299 (32%)
TM helix 1 34..60 CDD:320668 8/25 (32%)
TM helix 2 67..93 CDD:320668 9/25 (36%)
TM helix 3 105..135 CDD:320668 11/29 (38%)
TM helix 4 146..167 CDD:320668 10/20 (50%)
TM helix 5 193..222 CDD:320668 7/44 (16%)
TM helix 6 241..271 CDD:320668 13/29 (45%)
TM helix 7 284..309 CDD:320668 11/24 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 364..407
LkrNP_647968.3 7tmA_leucokinin-like 36..329 CDD:320515 97/299 (32%)
TM helix 1 37..63 CDD:320515 8/25 (32%)
TM helix 2 70..95 CDD:320515 9/24 (38%)
TM helix 3 108..138 CDD:320515 11/29 (38%)
TM helix 4 149..170 CDD:320515 10/20 (50%)
TM helix 5 205..234 CDD:320515 6/28 (21%)
TM helix 6 254..284 CDD:320515 13/29 (45%)
TM helix 7 297..322 CDD:320515 11/24 (46%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.