DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TACR2 and tacr3

DIOPT Version :10

Sequence 1:NP_001048.2 Gene:TACR2 / 6865 HGNCID:11527 Length:398 Species:Homo sapiens
Sequence 2:XP_002934808.1 Gene:tacr3 / 100486525 XenbaseID:XB-GENE-985728 Length:431 Species:Xenopus tropicalis


Alignment Length:346 Identity:186/346 - (53%)
Similarity:244/346 - (70%) Gaps:10/346 - (2%)


- Green bases have known domain annotations that are detailed below.


Human     8 TEANISSGPESNTTGITAFSMPSWQLALWATAYLALVLVAVTGNAIVIWIILAHRRMRTVTNYFI 72
            |:.|:|| |.::     .|..|.|::|||:.||.::|.|||.||.|||||||||:|||||||||:
 Frog    30 TQRNVSS-PVAH-----KFVQPPWRIALWSLAYGSMVAVAVFGNIIVIWIILAHKRMRTVTNYFL 88

Human    73 VNLALADLCMAAFNAAFNFVYASHNIWYFGRAFCYFQNLFPITAMFVSIYSMTAIAADRYMAIVH 137
            ||||.:|..|||||...||:||.||.||||.|:|.|.|.||||::|.|||||:|||.||||||:.
 Frog    89 VNLAFSDASMAAFNTLVNFIYALHNEWYFGEAYCRFHNFFPITSIFASIYSMSAIAVDRYMAIID 153

Human   138 PFQPRLSAPSTKAVIAGIWLVALALASPQCFYSTVTMDQGATKCVVAWPEDSGGKTLLLYHLVVI 202
            |.:|||||.|||.||..||:.|:.||.|||.||.:.:.:..|.|::.||   |....|.|..:::
 Frog   154 PLKPRLSATSTKVVIGSIWIFAILLAFPQCLYSKIRVTRTRTLCMLVWP---GKDERLTYQFILV 215

Human   203 ALIYFLPLAVMFVAYSVIGLTLWRRAVPGHQAHGANLRHLQAMKKFVKTMVLVVLTFAICWLPYH 267
            .|:|.|||.||.|.|:::|:|||...:||..:...: ..|:|.:|.||.|::||:||||||||||
 Frog   216 LLVYVLPLIVMGVTYTIVGITLWGGEIPGDTSDKYH-EQLRAKRKVVKMMIVVVVTFAICWLPYH 279

Human   268 LYFILGSFQEDIYCHKFIQQVYLALFWLAMSSTMYNPIIYCCLNHRFRSGFRLAFRCCPWVTPTK 332
            ::|:..:....:...|:|||:|||:|||||||||||||||||||.|||:||:.|||.||::..:.
 Frog   280 IFFLADALDIKLDRWKYIQQIYLAIFWLAMSSTMYNPIIYCCLNKRFRAGFKRAFRWCPFIEVSS 344

Human   333 EDKLELTPTTSLSTRVNRCHT 353
            .|:|||..|....||.:..:|
 Frog   345 YDELELKSTRFHPTRQSSLYT 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TACR2NP_001048.2 7tmA_SKR_NK2R 34..318 CDD:320670 163/283 (58%)
TM helix 1 35..61 CDD:320670 17/25 (68%)
TM helix 2 68..94 CDD:320670 16/25 (64%)
TM helix 3 106..136 CDD:320670 21/29 (72%)
TM helix 4 147..168 CDD:320670 12/20 (60%)
TM helix 5 194..223 CDD:320670 12/28 (43%)
TM helix 6 243..273 CDD:320670 18/29 (62%)
TM helix 7 286..311 CDD:320670 22/24 (92%)
tacr3XP_002934808.1 7tm_GPCRs 50..330 CDD:475119 163/283 (58%)
TM helix 1 52..76 CDD:320669 15/23 (65%)
TM helix 2 85..107 CDD:320669 13/21 (62%)
TM helix 3 123..145 CDD:320669 14/21 (67%)
TM helix 4 166..182 CDD:320669 7/15 (47%)
TM helix 5 208..231 CDD:320669 10/22 (45%)
TM helix 6 261..283 CDD:320669 15/21 (71%)
TM helix 7 298..323 CDD:320669 22/24 (92%)

Return to query results.
Submit another query.