DRSC/TRiP Functional Genomics Resources

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Protein Alignment TACR2 and tacr2

DIOPT Version :10

Sequence 1:NP_001048.2 Gene:TACR2 / 6865 HGNCID:11527 Length:398 Species:Homo sapiens
Sequence 2:NP_001314788.1 Gene:tacr2 / 100002125 ZFINID:ZDB-GENE-090312-188 Length:376 Species:Danio rerio


Alignment Length:382 Identity:213/382 - (55%)
Similarity:256/382 - (67%) Gaps:28/382 - (7%)


- Green bases have known domain annotations that are detailed below.


Human     3 TCDIVTEANISSGPESNTTGITAFSMPSWQLALWATAYLALVLVAVTGNAIVIWIILAHRRMRTV 67
            |.|.::.:.:....:.|.|.|..|..|.||:||||.||..:|:::..||..||||||||:|||||
Zfish     4 TLDPLSSSLLYYDEDGNETSINLFEQPDWQVALWAIAYTLIVIISFIGNVTVIWIILAHKRMRTV 68

Human    68 TNYFIVNLALADLCMAAFNAAFNFVYASHNIWYFGRAFCYFQNLFPITAMFVSIYSMTAIAADRY 132
            |||||||||.:|..||.||..||||||.||.||||..:|.|||.|||||||.|||||.|||.|||
Zfish    69 TNYFIVNLAFSDASMATFNTVFNFVYALHNDWYFGLGYCKFQNFFPITAMFSSIYSMAAIAVDRY 133

Human   133 MAIVHPFQPRLSAPSTKAVIAGIWLVALALASPQCFYSTVTMDQGATKCVVAWPEDSGGKTLLLY 197
            |||:||.:||||:.:||.:|..||.||.:||.|||:|::.......|.|:|.||:|.|||..|.|
Zfish   134 MAIIHPLKPRLSSTTTKLLIGVIWTVAFSLAFPQCYYASTKFYFPRTVCMVEWPDDYGGKHQLSY 198

Human   198 HLVVIALIYFLPLAVMFVAYSVIGLTLWRRAVPGHQA-HGANLRHLQAMKKFVKTMVLVVLTFAI 261
            .:.||.|||.|||.||.|.||::|..||...:||..: |..|  .:||.:|.||.|::||.||||
Zfish   199 QIAVIILIYLLPLLVMLVTYSLVGQRLWGSEIPGEASDHYQN--QMQAKRKVVKMMIVVVTTFAI 261

Human   262 CWLPYHLYFILGSFQEDIYCHKFIQQVYLALFWLAMSSTMYNPIIYCCLNHRFRSGFRLAFRCCP 326
            ||||||:|||||||..|||...:|||||||:|||||||||||||||||||.|||||||.||:.||
Zfish   262 CWLPYHIYFILGSFNRDIYKQHYIQQVYLAIFWLAMSSTMYNPIIYCCLNQRFRSGFRKAFQWCP 326

Human   327 WVTPTKEDKLEL-------------TPTTSLSTRVNRCHTKETLFMAGDTAPSEATS 370
            :|..::||.:||             |.|||:   |.|.|..|         |.:.||
Zfish   327 FVKISEEDNMELQHMRTFHMRRSYRTETTSV---VVRNHANE---------PEDTTS 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TACR2NP_001048.2 7tmA_SKR_NK2R 34..318 CDD:320670 181/284 (64%)
TM helix 1 35..61 CDD:320670 14/25 (56%)
TM helix 2 68..94 CDD:320670 18/25 (72%)
TM helix 3 106..136 CDD:320670 24/29 (83%)
TM helix 4 147..168 CDD:320670 11/20 (55%)
TM helix 5 194..223 CDD:320670 16/28 (57%)
TM helix 6 243..273 CDD:320670 21/29 (72%)
TM helix 7 286..311 CDD:320670 23/24 (96%)
tacr2NP_001314788.1 7tm_GPCRs 35..318 CDD:475119 181/284 (64%)
TM helix 1 37..61 CDD:320670 12/23 (52%)
TM helix 2 70..92 CDD:320670 14/21 (67%)
TM helix 3 108..130 CDD:320670 17/21 (81%)
TM helix 4 151..167 CDD:320670 7/15 (47%)
TM helix 5 196..219 CDD:320670 13/22 (59%)
TM helix 6 249..271 CDD:320670 16/21 (76%)
TM helix 7 286..311 CDD:320670 23/24 (96%)

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