DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SYT4 and Syt1

DIOPT Version :9

Sequence 1:NP_065834.1 Gene:SYT4 / 6860 HGNCID:11512 Length:425 Species:Homo sapiens
Sequence 2:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster


Alignment Length:435 Identity:151/435 - (34%)
Similarity:218/435 - (50%) Gaps:73/435 - (16%)


- Green bases have known domain annotations that are detailed below.


Human     3 PITTSREEFDEIPTVV----------GIFSAFGLVFTVSLFAWICCQRKSSKSNKTPPYKFVHVL 57
            |:....|...|:.|.|          |:.:...|||.|.......|.|:..|..:|.        
  Fly    88 PVIKKIEHVGEVVTEVIAERTGLPTWGVVAIIILVFLVVFGIIFFCVRRFLKKRRTK-------- 144

Human    58 KGVDIYPENLNSKKKFGADDKNEVKNKPAVPKNSLHLDLEKRDLNGNFPKTNLKPGSPSDLENAT 122
                      :.|.|.|                   :|::...|.|:..|..::|......|||.
  Fly   145 ----------DGKGKKG-------------------VDMKSVQLLGSAYKEKVQPDMEELTENAE 180

Human   123 PKLFLEGEKESVSPESLKSSTSLTSEEKQEKLGTLFFSLEYNFERKAFVVNIKEARGLPAMDEQS 187
                 ||::|              .::.::|||.|.|.|||:|...:..|.:.:|..|||:| ..
  Fly   181 -----EGDEE--------------DKQSEQKLGRLNFKLEYDFNSNSLAVTVIQAEELPALD-MG 225

Human   188 MTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDRFSRDD 252
            .|||||:|:.:||:||.|.:|:|.||||.|.|:|||||..:||.......|.|.|..|||||:.|
  Fly   226 GTSDPYVKVYLLPDKKKKFETKVHRKTLSPVFNETFTFKSLPYADAMNKTLVFAIFDFDRFSKHD 290

Human   253 IIGEVLIPLSGIELSEGKMLMNREIIKRNVRKSSGR---GELLISLCYQSTTNTLTVVVLKARHL 314
            .||||.:||..|:|:: .:...|:::  :|....|:   |::..||.|..|...||||:|:|::|
  Fly   291 QIGEVKVPLCTIDLAQ-TIEEWRDLV--SVEGEGGQEKLGDICFSLRYVPTAGKLTVVILEAKNL 352

Human   315 PKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCEGLEDISVEFLVLDS 379
            .|.||.||||||||:.:....||:.||||.:||||.|..:||.|.|::|.|.::.|.:...|:|.
  Fly   353 KKMDVGGLSDPYVKIAIMQNGKRLKKKKTSIKKCTLNPYYNESFSFEVPFEQIQKICLVVTVVDY 417

Human   380 ERGSRNEVIGQLVLGAAAEGTGGEHWKEICDYPRRQIAKWHVLCD 424
            :|...:|.||:.:||....||...||.::...|||.||:||.|.|
  Fly   418 DRIGTSEPIGRCILGCMGTGTELRHWSDMLASPRRPIAQWHTLKD 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SYT4NP_065834.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..93 1/19 (5%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..147 3/19 (16%)
C2A_Synaptotagmin-4-11 153..279 CDD:176034 59/125 (47%)
C2B_Synaptotagmin-4 288..423 CDD:176049 60/137 (44%)
Syt1NP_523460.2 Podoplanin 5..136 CDD:283467 11/47 (23%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 59/127 (46%)
C2B_Synaptotagmin-1 326..461 CDD:176047 60/134 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

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