Sequence 1: | XP_001063315.1 | Gene: | Itga2b / 685269 | RGDID: | 1596428 | Length: | 1037 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_523750.2 | Gene: | scb / 36692 | FlyBaseID: | FBgn0286785 | Length: | 1115 | Species: | Drosophila melanogaster |
Alignment Length: | 1158 | Identity: | 280/1158 - (24%) |
---|---|---|---|
Similarity: | 454/1158 - (39%) | Gaps: | 250/1158 - (21%) |
- Green bases have known domain annotations that are detailed below.
Rat 37 VKFSVYTGPNGSHFGFSVDFHKDSHGSVSIVVGAPRALNANQ-----EETGGVFLCPWKANNGTC 96
Rat 97 TSLLFDLRDET-RKLSLQTFQT-FKTGQGLGASV---LSWNDVIVACAP---------------- 140
Rat 141 -WQHWNVLEKYDEAEKTPVGGCFVAELQSGGRAEYSPCRSNTMSSVYSQGFSGDKRYCEAGFSLA 204
Rat 205 VTQAG-ELVLGAPGGYFFLGLLVRV----PIENIISSYRPGTLLWHVSNQRFSYDSSNPVYF--- 261
Rat 262 -----------HGYRGYSVAVGEFDGDLST-TEYIFGAPTWSWTLGAVEILDSYYQTLHRLH--- 311
Rat 312 GEQMASYFGHSVAVTDVNGDGRHDLLVGAPLY-MESRVDRKLAEVGRVYLFLQPKGL-----QAL 370
Rat 371 SSPTLVLTGTQVYGRFGSAIAPLGDLNRDGYNDVAVAAPYGGPSGQGQVLIFLGQSEGLSPRPSQ 435
Rat 436 VLDSPF--PTGSG---FGFSLRGSVDIDDNGYPDLIVGAYGASKVAVYRAQPVVM--ATVQLMVQ 493
Rat 494 DSLNPTLKNCVLEQTKTPV-SCFNVQMCVGATGHNIPQKLHLKAELQLDLQKPRQARRVLLLASR 557
Rat 558 --QASLTLSLDLGGRNKPICHTIKAFLRDEADFRDKLSPIVLSLNVSLP---PEETGVAPAVVLH 617
Rat 618 GVTHVQEQTRIIL---DCGEDNLCVPQLQLTATAGDSPLLIGADNVLELKVNASNDGEGAYEAEL 679
Rat 680 AVHLPPGAHYIRAFSNVKGFERLVCTQKKEN---ESRLALCEL--GNPMKKDTRIGITMLVSVEI 739
Rat 740 LEEAGDSVSFQLQIRSKN-SQNPNSEAVLLPVAVRAEAAVELRGNSFPASLVVAAEEVDKEQDGL 803
Rat 804 DSWVSRVEHTYELHNNGPGTVNGLSLIIHLPGQSQPSDLLYILDVQPKGGLLCSTQPPPKLLKVD 868
Rat 869 R-------------RLTTPSPSSIRR-----------------IHHDRDRREAS--PQGSKQTEQ 901
Rat 902 QDPVLVSCN---------------------GSAPCT---VVECELQEMVRGQRAMVTVQATLGLS 942
Rat 943 I-LRQR--------------PQEQFVLQSHAWFNVSSLPYSVPVVSLPSGQGLVQTHLLRALEER 992
Rat 993 DIPVWWVLVGVLGGLLLLTLLVLAMWKAGFFKRNRP----------PLEEEEE 1035 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Itga2b | XP_001063315.1 | Int_alpha | 46..102 | CDD:214549 | 18/60 (30%) |
Int_alpha | 315..375 | CDD:214549 | 25/65 (38%) | ||
Int_alpha | 383..437 | CDD:214549 | 29/53 (55%) | ||
Int_alpha | 444..>484 | CDD:214549 | 18/42 (43%) | ||
Integrin_alpha2 | 480..920 | CDD:285619 | 94/512 (18%) | ||
scb | NP_523750.2 | Int_alpha | 51..103 | CDD:214549 | 18/58 (31%) |
FG-GAP | 350..388 | CDD:280083 | 17/42 (40%) | ||
Int_alpha | 409..459 | CDD:214549 | 29/52 (56%) | ||
Int_alpha | 473..>515 | CDD:214549 | 19/41 (46%) | ||
Integrin_alpha2 | 507..829 | CDD:285619 | 77/370 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166335740 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3637 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.740 |