DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atp8b2 and CG33298

DIOPT Version :9

Sequence 1:XP_038959700.1 Gene:Atp8b2 / 685152 RGDID:1597731 Length:1359 Species:Rattus norvegicus
Sequence 2:NP_995666.1 Gene:CG33298 / 2768929 FlyBaseID:FBgn0032120 Length:1517 Species:Drosophila melanogaster


Alignment Length:1425 Identity:443/1425 - (31%)
Similarity:692/1425 - (48%) Gaps:290/1425 - (20%)


- Green bases have known domain annotations that are detailed below.


  Rat    72 VTSAPRPKLTQSSGPGPRGVGRRARLLWGAGACGQRSRAPPPQPPAWAGRGRRAERRARSAKEKV 136
            :|.:| |.....:|.|...||.:...:...|...:.:|.|.....|..|||   ..|..|..|.:
  Fly   136 ITDSP-PGSAAPAGRGHSRVGSKTDFILPPGHKEEPAREPSAPTSATGGRG---HSRQASRSESI 196

  Rat   137 HGEVEGSRGSPVLSIVLTGLRGLPWIAGTLLGEMALC-------AKKR-----------PPEEER 183
            :              .|......||     ...:.||       .::|           ||:..:
  Fly   197 Y--------------TLRRTEAPPW-----WKRLTLCNYNTGDKFEERSYRTVVPNHTVPPKTPK 242

  Rat   184 RARANDREYNEKFQYASNCIKTSKYNILTFLPVNLFEQFQEVANTYFLFLLILQLIPQISSLSWF 248
            |...|.       |:..|.|:|:||.:|:|:|.||.|||..|||.||:|:::|..:|:||:....
  Fly   243 RDHPNG-------QFVGNKIRTTKYTLLSFIPKNLLEQFHRVANLYFIFIVLLNWVPEISAFGKE 300

  Rat   249 TTIVPLVLVLTITAVKDATDDYFRHKSDNQVNSRHSQVLINGVLQ---QEQWMNVCVGDIIKLEN 310
            ..::|::.||.:|||||..:|..|..||.::|:...:| .:|..:   :.:|..:.||||:.|.|
  Fly   301 VAMIPVLFVLGVTAVKDLFEDRRRRASDKRINNTTCRV-YDGETERYKKVKWQELRVGDIVHLSN 364

  Rat   311 NQFVAADLLLLSSSEPHGLCYIETSELDGETNMKVRQAIPVTSELGDISQLAKFDGEVICEPPNN 375
            |:.|.||:|||.:|:|.|:|||:|.:||||||:|.|:.:....|:..|...:||...|..:.|..
  Fly   365 NETVPADILLLRTSDPQGVCYIDTCDLDGETNLKRREVVRGFEEMQSIFVPSKFVSRVEADAPTT 429

  Rat   376 KLDKFSGAL-YWKGNKFPLSNQNMLLRGCVLRNTEWCFGLVIFAGPDTKLMQNSGRTKFKRTSID 439
            ||.:|.||| :..|.:.|:|.:.:|||...|:||::..|:|::||.:||.|.|:...::||:.::
  Fly   430 KLYRFHGALIHPTGERVPISTECLLLRESRLKNTDYIEGIVVYAGHETKSMLNNSGPRYKRSQVE 494

  Rat   440 RLMNTLVLWIFGFLVCMGVILAIGNAIWEHEVGTRFQV-YLPWDEAVDSAFFSGFLSFWSYIIIL 503
            :.||..|:|....|:.:.|:.|||..:|.... |.|.| |||.::.  :|.......||:||:||
  Fly   495 QQMNIDVIWCVIILLILCVVGAIGCRMWLSSF-THFPVPYLPPNKL--TANMESMWIFWTYIVIL 556

  Rat   504 NTVVPISLYVSVEVIRLGHSYFINWDKKMFCMKKRTPAEARTTTLNEELGQVEYIFSDKTGTLTQ 568
            ..::|:||||::|:.::...:.|:.:..:|..:.....|.|...:.|||||:::||:|||||||:
  Fly   557 QVMIPLSLYVTIELCKILQVFHIHNNVDLFDAETNKQTECRAMNITEELGQIQHIFTDKTGTLTE 621

  Rat   569 NIMVFNKCSINGHSYGDVFDVLGHKAELGERPEPVDFSFNPLADKKFLFWDPSLLEAVKMGDPHT 633
            |.|:|.:|.:||..|......|.........|.|      ||.....|..|.:.|.......||.
  Fly   622 NKMIFRRCVVNGSDYNHPPSELEKIYSKPGAPAP------PLIPNDNLNSDMAQLTQGTYLTPHA 680

  Rat   634 ---HEFFRLLSLCHTVM------------------------------------------------ 647
               .||..:|::|:||:                                                
  Fly   681 QRIQEFLVVLAICNTVIVGAAPHRDMMNASGIIEVQQIGNSPANLKHGKQRQKLLASSTSTTTTT 745

  Rat   648 ----------------------------------------------------------------S 648
                                                                            |
  Fly   746 TIINGPTTQPQVVSIPADRYIRLAESRSVTPSPPPNLLFALPAQSHQPTLSPISSSAESSPNSES 810

  Rat   649 EE-----KNE-------------------------------------------GELY-------- 657
            |.     ||:                                           |.:|        
  Fly   811 ESPSPPMKNKSLSNSISPTGRAKAVINSKITSIATFLNAKTQGKRMKLPSSKTGTIYRTADGRPL 875

  Rat   658 YKAQSPDEGALVTAARNFGFVFRSRTPKTVTVH--ELGTSITYQLLAILDFNNIRKRMSVIVRN- 719
            |:|:||||.|||.||.::.....:|:|..:.|.  ..|.:..|::|.:|.|::.||.||::||. 
  Fly   876 YEAESPDELALVNAAYSYDCCLLNRSPNQILVSMPMAGATREYEILKVLPFDSSRKCMSIVVRQI 940

  Rat   720 PEGKIRLYCKGADT----ILLDRLHPSTQELLNSTTDH-LNEYAGDGLRTLVLAYKDLDEEYYEE 779
            ...:|.||.||||:    :|:...|.|.:.:|...|.. |:.||.:|||.||:|.:.|:...|.:
  Fly   941 GSQEIVLYTKGADSSIMPVLVPCSHNSPEGILREQTQQLLDRYAREGLRILVMAKRTLNSADYTD 1005

  Rat   780 WARRRLQASLAQDSREDRLASIYEEVESDMMLLGATAIEDKLQQGVPETIALLTLANIKIWVLTG 844
            |..|..:..::.::||.||...:.::||::.|||||.|||:||.|||||||.|..|.|.:|||||
  Fly  1006 WWARHQEIEMSLENRERRLRDSFAKLESNLTLLGATGIEDRLQDGVPETIASLLSAGISVWVLTG 1070

  Rat   845 DKQETAVNIGYSCKMLTDDMTEVFIVTGHTVLEVREELRKARKKMVDSSHAVGNGFTYQGNLSSS 909
            ||.|||:||.||.|:.|..|                ||.:...:..|::....|  .|..::.:.
  Fly  1071 DKPETAINIAYSAKLFTQQM----------------ELIRLTARSRDAAETAIN--FYLTDMEND 1117

  Rat   910 KLTSVL----EAVAGEYALVINGHSLAHALE--ADMELEFLETACACKAVICCRVTPLQKAQVVE 968
            |.||.|    .....:.|||::|.:|...|:  :.:.|.||..:..|.:|:|||.||||||.:|:
  Fly  1118 KTTSTLGYGQSLRKKQRALVVDGKTLTFILDPKSKLILPFLRLSKRCASVLCCRSTPLQKAYLVK 1182

  Rat   969 LVKKYKKAVTLAIGDGANDVSMIKTAHIGVGISGQEGIQAVLASDYSFSQFKFLQRLLLVHGRWS 1033
            :||:.....||||||||||||||:.|.:|||||||||:|||:|:|::..:|::|:||||.||.|.
  Fly  1183 VVKEELNLRTLAIGDGANDVSMIQMADVGVGISGQEGMQAVMAADFTLPRFRYLERLLLAHGYWC 1247

  Rat  1034 YLRMCKFLCYFFYKNFAFTMVHFWFGFFCGFSAQTVYDQYFITLYNIVYTSLPVLAMGVFDQDVP 1098
            |.|:.:.:.||||||.||..:.||:..:||||.|.:.||.::.|||:::||||.||:||:|:.|.
  Fly  1248 YDRLSRMILYFFYKNAAFVFLIFWYQLYCGFSGQVMMDQMYLMLYNLIFTSLPPLAIGVYDKRVA 1312

  Rat  1099 EQRSMEYPKLYEPGQLNLLFNKREFFICIAQGIYTSVLMFFIPYGVFAEATRDDGTQLADYQSFA 1163
            |...::.|.||:.|:|.:.:...:|::.:...:|.|:::||:....:||:  |.|     ...|.
  Fly  1313 EDLLLKNPYLYKNGRLGVAYRPHDFWLILLDALYQSLVIFFVALCAYAES--DVG-----IWEFG 1370

  Rat  1164 VTVATSLVIVVSVQIGLDTGYWTAINHFFIWGSLAVY--FAILF---AMHSNGLFDMFPNQFRFV 1223
            .|:..|.:....|...::...||.::...|..||..:  |||::   .|:..|:...:...|...
  Fly  1371 TTITASCLFANLVHCAIEIRSWTVLHVLSIVLSLGSFYLFAIVYDSVCMNCFGVRSSYWVIFVCF 1435

  Rat  1224 GNAQNTLAQPTVWLTIVLTTAVCIMPVVAFRFLRLSLKPDLSDTVRYTQLVRKKQKAQHR 1283
            .:|.:       ||.|:|:|.|.::|.:....:|:||.||.|     |:::.:.::.:.|
  Fly  1436 ASAVH-------WLVIMLSTVVAVLPRLLLTTVRISLCPDDS-----TKVILQSKRERSR 1483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atp8b2XP_038959700.1 P-type_ATPase_APLT_Dnf-like 200..1141 CDD:319770 380/1130 (34%)
CG33298NP_995666.1 PhoLip_ATPase_N 249..299 CDD:292826 24/49 (49%)
ATPase-Plipid 250..1473 CDD:273734 414/1269 (33%)
E1-E2_ATPase 302..>394 CDD:278548 38/92 (41%)
Cation_ATPase <880..965 CDD:289987 31/84 (37%)
HAD_like <1177..1240 CDD:304363 37/62 (60%)
PhoLip_ATPase_C 1223..1468 CDD:292829 85/258 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53737
OrthoDB 1 1.010 - - D587717at2759
OrthoFinder 1 1.000 - - FOG0000076
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.930

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