Sequence 1: | XP_038938627.1 | Gene: | Itga9 / 685004 | RGDID: | 1311191 | Length: | 1036 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_523750.2 | Gene: | scb / 36692 | FlyBaseID: | FBgn0286785 | Length: | 1115 | Species: | Drosophila melanogaster |
Alignment Length: | 1210 | Identity: | 282/1210 - (23%) |
---|---|---|---|
Similarity: | 489/1210 - (40%) | Gaps: | 315/1210 - (26%) |
- Green bases have known domain annotations that are detailed below.
Rat 17 LLLALVAAGVPAGAYNIDAQRPVRFQGPP-----------GSFFGYAVLEHFHDNTRWVLVGAPK 70
Rat 71 ADSKYST--SVKSPGAVFKCRV------------HTNPDRRCTELDMARERNRGESCGKTCRGDR 121
Rat 122 DDEWMGVSLARQPKADGRVLACAHRWKNIYYETDHILPHGFCYLIPSNLQAKGR---MLIPCYEE 183
Rat 184 YKKKYGEEHGS--------CQAGIAGFFTEE--LVIMGAPGSFYWAGTL---KVLNLTDNTYFKL 235
Rat 236 NDDAIMNRR---------YT--------------------YLGYAVTAGHF--SHPSVTDVVGGA 269
Rat 270 PQ-DEGIGKVYIFRADRRSGTLIKIFQASGKKMGSYFGSSLCAVDLNMDGLSDLLVGAPM--FSE 331
Rat 332 IRDEGQVTVYLNQGHGVLEEQLTLTGDAAYNAHFGESIASLGDLDDDGFPDVAVGAPMEDDFAGT 396
Rat 397 VYIYHGDAQGIVPQYSMKLSGRKINPI---LQMFGQSISGGIDMDGNGYPDVTVGAFLSDSVVLL 458
Rat 459 RARPVITVDVSIFLPGSINITAPQCHDGQQPVNCLNVTVCFRFHGKNVPGEIGLNYNLTADVAQK 523
Rat 524 EK--------GQLPRVYFVLLGET-AGQVSERLQLTHMDEVCHHYVAHVKRRVQDVISPIVFEAA 579
Rat 580 YSLGEHVIGEED----RELPDLTPVLRWKKGQRIAQKNQTVFERNCRSEDCAADLQLRGKLLLSS 640
Rat 641 VDEKTTHLALGAVKNISLNISISNLGDDAYDANVSFNVSRELFFINMWQKEEMGISCELLESDFL 705
Rat 706 KCSV--GFPFMRSKSKYEFSVIFDTSHLSGEEEIL-------------------------SFIVT 743
Rat 744 AQSGNMERSE------------------------ALHDNTLTLTIPLVHEV--DTSITGIVSPTS 782
Rat 783 FVYGESVDASNFIQLD--DQE---CHFQPVNITL---------------QVYNMGPS-------- 819
Rat 820 TLPGSSVSISFPSR------LSPGGAEMF------QVQDMVVSQEKGNCSLQRNPTPCIIPQEQE 872
Rat 873 NIFHTIFAFFSKSGRKVLDC-EKTGSFCLTLHCNLSALPKEESRAIDLYMLLNTEILKKDSSSVI 936
Rat 937 -----QFMARAKVKVEPALRVVEIANGNPEETLVVFEALHNLEPR--------GYVVGWIIAISL 988
Rat 989 LVGILIFLLLAVLLWKMGFFRRRYKEIIE--AEKNRKENE 1026 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Itga9 | XP_038938627.1 | Int_alpha | 45..102 | CDD:214549 | 17/81 (21%) |
Int_alpha | 245..295 | CDD:214549 | 22/72 (31%) | ||
Int_alpha | 301..347 | CDD:214549 | 20/47 (43%) | ||
Int_alpha | 362..415 | CDD:214549 | 24/52 (46%) | ||
Int_alpha | 425..>467 | CDD:214549 | 19/41 (46%) | ||
Integrin_alpha2 | 460..904 | CDD:400650 | 107/550 (19%) | ||
scb | NP_523750.2 | Int_alpha | 51..103 | CDD:214549 | 13/55 (24%) |
FG-GAP | 350..388 | CDD:280083 | 15/37 (41%) | ||
Int_alpha | 409..459 | CDD:214549 | 24/51 (47%) | ||
Int_alpha | 473..>515 | CDD:214549 | 20/47 (43%) | ||
Integrin_alpha2 | 507..829 | CDD:285619 | 72/368 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166335743 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D105280at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR23220 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.950 |