DRSC/TRiP Functional Genomics Resources

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Protein Alignment VAMP2 and Vamp7

DIOPT Version :10

Sequence 1:NP_001317054.1 Gene:VAMP2 / 6844 HGNCID:12643 Length:118 Species:Homo sapiens
Sequence 2:NP_610524.1 Gene:Vamp7 / 36015 FlyBaseID:FBgn0266186 Length:218 Species:Drosophila melanogaster


Alignment Length:80 Identity:22/80 - (27%)
Similarity:49/80 - (61%) Gaps:0/80 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    34 LQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNLKMM 98
            :.:...|:||:.|||..|:|.:.:|.:||..|.::.:.|...:..|..::..|.|:.:|||:::.
  Fly   126 ISRVHGQIDELKDIMVKNIDSLRDRGEKLELLVNKTENLSNNSVAFRKASRNLARQMFWKNIRVY 190

Human    99 IILGVICAIILIIII 113
            :::|::...|:.:|:
  Fly   191 VVVGLVITFIVYVIV 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VAMP2NP_001317054.1 R-SNARE_VAMP2 32..94 CDD:277223 17/59 (29%)
Vamp7NP_610524.1 Longin 4..117 CDD:341428
R-SNARE_VAMP7 124..188 CDD:277224 19/61 (31%)
Blue background indicates that the domain is not in the aligned region.

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