Protein Alignment VAMP1 and nSyb

DIOPT Version :10

• Sequence 1: NP_055046.1
• Gene: VAMP1 / 6843
• HGNCID: 12642
• Length: 118
• Species: Homo sapiens
• Sequence 2: NP_001261269.1
• Gene: nSyb / 38196
• FlyBaseID: FBgn0013342
• Length: 206
• Species: Drosophila melanogaster
• Alignment Length: 119
• Identity: 69/119 - (57%)
• Similarity: 84/119 - (70%)
• Gaps: 10/119 - (8%)

Human     2 SAPA--------QPPAEGTEGTAPGGGPPGPPPNMTSNRRLQQTQAQVEEVVDIIRVNVDKVLER 58
            :|||        .|..||.:|...||  |..|..:.:.:|||||||||:|||||:|.||:|||||
  Fly     4 AAPAGDAPPNAGAPAGEGGDGEIVGG--PHNPQQIAAQKRLQQTQAQVDEVVDIMRTNVEKVLER 66

Human    59 DQKLSELDDRADALQAGASQFESSAAKLKRKYWWKNCKMMIMLGAICAIIVVVI 112
            |.|||||||||||||.||||||..|.|||||:|.:|.||||::|.|..::|.:|
  Fly    67 DSKLSELDDRADALQQGASQFEQQAGKLKRKFWLQNLKMMIIMGVIGLVVVGII 120

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
VAMP1	NP_055046.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..36		13/41 (32%)
		R-SNARE_VAMP2	32..94	CDD:277223	49/61 (80%)
nSyb	NP_001261269.1	R-SNARE_VAMP2	40..102	CDD:277223	49/61 (80%)