DRSC/TRiP Functional Genomics Resources

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Protein Alignment SURF1 and SHY1

DIOPT Version :10

Sequence 1:NP_003163.1 Gene:SURF1 / 6834 HGNCID:11474 Length:300 Species:Homo sapiens
Sequence 2:NP_011627.1 Gene:SHY1 / 853009 SGDID:S000003344 Length:389 Species:Saccharomyces cerevisiae


Alignment Length:341 Identity:92/341 - (26%)
Similarity:145/341 - (42%) Gaps:99/341 - (29%)


- Green bases have known domain annotations that are detailed below.


Human    37 VAWRPSRCGSSAAEASATKAEDDSFLQWVLL----LIPVTAFGLGTWQVQRRKWKLNLIAELESR 97
            |.|:|.:.|.|..:.|   ..:.||.:.::|    .:|:.:|.||||||:|.|||..|||..|::
Yeast    47 VDWKPIKTGKSPNDDS---RRERSFGKKIVLGLMFAMPIISFYLGTWQVRRLKWKTKLIAACETK 108

Human    98 VLAEPVPLPAD--PMELKNLEYRPVKVRGCFDHSKELYMMPRTMVDPVREAREGGLISSSTQSGA 160
            :..||:|||..  |...::.|||.|.:.|.|.|::|:::.||         ::.|      :.|.
Yeast   109 LTYEPIPLPKSFTPDMCEDWEYRKVILTGHFLHNEEMFVGPR---------KKNG------EKGY 158

Human   161 YVVTPFHCTDLGVTILVNRGFVPRKKVNPETRQKGQI----EGEVDLIGMVRLTETRQPFV-PEN 220
            ::.|||...|.|..:|:.||::..:||.|::|....:    |..:.::.:||..:.|.... .:.
Yeast   159 FLFTPFIRDDTGEKVLIERGWISEEKVAPDSRNLHHLSLPQEEHLKVVCLVRPPKKRGSLQWAKK 223

Human   221 NPERNHWHYRDLEAMARITGAEPIFIDANF----------------------------------- 250
            :|....|...|:..|||.:|..||...|.:                                   
Yeast   224 DPNSRLWQVPDIYDMARSSGCTPIQFQALYDMKDHPIIEEHTRNEASQNNSTSSLWKFWKREPTT 288

Human   251 --------------------------------QSTVPGGPIGGQTRVTLRNEHLQYIVTWYGLS- 282
                                            |....|.|||.:..:.|:|.||||:||||||| 
Yeast   289 AVNGTQAVDNNTSKPRSRQEMPTDQTIEFDERQFIKAGVPIGRKPTIDLKNNHLQYLVTWYGLSF 353

Human   283 AATSYL--WFKKFLRG 296
            .:|.:|  ..:|..||
Yeast   354 LSTIFLIVALRKAKRG 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SURF1NP_003163.1 SURF1 74..288 CDD:119401 78/288 (27%)
SHY1NP_011627.1 SURF1 78..353 CDD:460447 77/289 (27%)

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