DRSC/TRiP Functional Genomics Resources

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Protein Alignment SURF1 and surf1

DIOPT Version :10

Sequence 1:NP_003163.1 Gene:SURF1 / 6834 HGNCID:11474 Length:300 Species:Homo sapiens
Sequence 2:NP_001073642.1 Gene:surf1 / 557970 ZFINID:ZDB-GENE-041108-2 Length:309 Species:Danio rerio


Alignment Length:270 Identity:178/270 - (65%)
Similarity:214/270 - (79%) Gaps:1/270 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    26 RSVLRVSPRPGVAWRPSRCG-SSAAEASATKAEDDSFLQWVLLLIPVTAFGLGTWQVQRRKWKLN 89
            :|:.|....|.:.:..:|.. .|.:....||..:|:||:|.|||||||.|.||||||:||||||.
Zfish    35 QSLFRRQDAPVLRYNLARFSQQSTSTVEGTKKGEDTFLKWFLLLIPVTTFCLGTWQVKRRKWKLE 99

Human    90 LIAELESRVLAEPVPLPADPMELKNLEYRPVKVRGCFDHSKELYMMPRTMVDPVREAREGGLISS 154
            ||:||:|...:.|:|||.|.||:|.||||.|.|||.||||||||::||:.|||.|||||.|.|||
Zfish   100 LISELQSLTTSVPIPLPVDTMEIKQLEYRRVTVRGHFDHSKELYILPRSPVDPEREAREAGRISS 164

Human   155 STQSGAYVVTPFHCTDLGVTILVNRGFVPRKKVNPETRQKGQIEGEVDLIGMVRLTETRQPFVPE 219
            |.:|||.|:|||.|||||:|||||||:||:.|:.||||.|||:..:|||:|:|||||.|:|||||
Zfish   165 SGESGANVITPFFCTDLGITILVNRGYVPKNKIKPETRTKGQVIEDVDLVGVVRLTEQRKPFVPE 229

Human   220 NNPERNHWHYRDLEAMARITGAEPIFIDANFQSTVPGGPIGGQTRVTLRNEHLQYIVTWYGLSAA 284
            ||.|.|.||||||||||::||||.|||||...|||||||||||||||||||||||::|||||.||
Zfish   230 NNVEANRWHYRDLEAMAKVTGAEEIFIDAVLDSTVPGGPIGGQTRVTLRNEHLQYVITWYGLCAA 294

Human   285 TSYLWFKKFL 294
            |||:|:.||:
Zfish   295 TSYMWYAKFI 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SURF1NP_003163.1 SURF1 74..288 CDD:119401 156/213 (73%)
surf1NP_001073642.1 SURF1 83..298 CDD:119401 156/214 (73%)

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