DRSC/TRiP Functional Genomics Resources

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Protein Alignment SURF1 and surf1

DIOPT Version :10

Sequence 1:NP_003163.1 Gene:SURF1 / 6834 HGNCID:11474 Length:300 Species:Homo sapiens
Sequence 2:NP_001016789.1 Gene:surf1 / 549543 XenbaseID:XB-GENE-6453389 Length:307 Species:Xenopus tropicalis


Alignment Length:303 Identity:185/303 - (61%)
Similarity:226/303 - (74%) Gaps:30/303 - (9%)


- Green bases have known domain annotations that are detailed below.


Human    10 GLRAAGLGRAPASAAWRSVLRVSPRPGVAWRPSRCGSS-----------------AAEASATKAE 57
            |:||..|......:.|.:             |.||..|                 ::.:.|.::.
 Frog    14 GVRAQLLNTPVRLSHWAT-------------PGRCTKSCHAYLQKNLRFCTTRSFSSVSPAAESS 65

Human    58 DDSFLQWVLLLIPVTAFGLGTWQVQRRKWKLNLIAELESRVLAEPVPLPADPMELKNLEYRPVKV 122
            :|:.|:|:||||||..|.|||||||||.|||.||.|:|:||..:|:||..||||:|.||||||||
 Frog    66 EDTVLKWLLLLIPVATFSLGTWQVQRRSWKLKLIQEMEARVSGKPIPLTTDPMEIKELEYRPVKV 130

Human   123 RGCFDHSKELYMMPRTMVDPVREAREGGLISSSTQSGAYVVTPFHCTDLGVTILVNRGFVPRKKV 187
            ||.||||||||::|||:|||.|||||.|.::|:|||||.|:|||:|:|||:||||||||||:|||
 Frog   131 RGHFDHSKELYILPRTLVDPEREAREAGQLASNTQSGAQVITPFYCSDLGITILVNRGFVPKKKV 195

Human   188 NPETRQKGQIEGEVDLIGMVRLTETRQPFVPENNPERNHWHYRDLEAMARITGAEPIFIDANFQS 252
            |||||.|||:.|||:|:|:|||.|||:||||.|:|.||.|||:||.|||::.|||||.|||:..|
 Frog   196 NPETRPKGQVSGEVELVGIVRLNETRKPFVPHNDPSRNLWHYKDLSAMAQVVGAEPILIDADRGS 260

Human   253 TVPGGPIGGQTRVTLRNEHLQYIVTWYGLSAATSYLWFKKFLR 295
            |||||||||||||||||||:|||||||||.|||:|||.|||:|
 Frog   261 TVPGGPIGGQTRVTLRNEHMQYIVTWYGLCAATTYLWCKKFIR 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SURF1NP_003163.1 SURF1 74..288 CDD:119401 159/213 (75%)
surf1NP_001016789.1 SURF1 81..296 CDD:119401 159/214 (74%)

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