DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SURF1 and Surf1

DIOPT Version :10

Sequence 1:NP_003163.1 Gene:SURF1 / 6834 HGNCID:11474 Length:300 Species:Homo sapiens
Sequence 2:NP_524758.1 Gene:Surf1 / 44498 FlyBaseID:FBgn0029117 Length:300 Species:Drosophila melanogaster


Alignment Length:296 Identity:129/296 - (43%)
Similarity:171/296 - (57%) Gaps:16/296 - (5%)


- Green bases have known domain annotations that are detailed below.


Human     7 LQLGLRAAGLGRAPASAAWRSVLR--VSPRPGVAWRPSRCGSSAAEASATKAEDDSFLQWVLLLI 69
            :|...|..|....|     |.:.|  ...||.|.|.     :|....:|...|..:.|.|.||||
  Fly    16 IQTVFRNPGTANNP-----RLITRKMTQQRPPVNWT-----TSIPNQAAKDKEKIAPLGWFLLLI 70

Human    70 PVTAFGLGTWQVQRRKWKLNLIAELESRVLAEPVPLPADPMELKNLEYRPVKVRGCFDHSKELYM 134
            |.|.||||.|||:|:.||..||.:|..::...||.||.|..:|..:|||.||:||.|.|.||:.:
  Fly    71 PATTFGLGCWQVKRKIWKEQLIKDLNKQLSTAPVALPDDLTDLAQMEYRLVKIRGRFLHDKEMRL 135

Human   135 MPRTMVDPVREAREGGLISSSTQSGAY-VVTPFHCTDLGVTILVNRGFVPRKKVNPETRQKGQIE 198
            .||:::.|.....:|||.|.......| :||||...|....:|||||:|.||:|.||||..||.:
  Fly   136 GPRSLIRPDGVETQGGLFSQRDSGNGYLIVTPFQLADRDDIVLVNRGWVSRKQVEPETRPLGQQQ 200

Human   199 GEVDLIGMVRLTETRQPFVPENNPERNHWHYRDLEAMARITGAEPIFIDANFQ-STVPGGPIGGQ 262
            .||:|..:||..|.|..|.|::  :.|.:.||||..|...|||.|:|:||.:. .|....|||||
  Fly   201 AEVELTAVVRKGEARPQFTPDH--KGNVYLYRDLARMCAATGAAPVFLDAVYDPQTAAHAPIGGQ 263

Human   263 TRVTLRNEHLQYIVTWYGLSAATSYLWFKKFLRGTP 298
            |||||||:||.|:|||:.||||||:||:::.::..|
  Fly   264 TRVTLRNDHLSYLVTWFSLSAATSFLWYRQIVKRIP 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SURF1NP_003163.1 SURF1 74..288 CDD:119401 105/215 (49%)
Surf1NP_524758.1 SURF1 74..289 CDD:119401 105/216 (49%)

Return to query results.
Submit another query.