Protein Alignment SURF1 and shy1

DIOPT Version :10

• Sequence 1: NP_003163.1
• Gene: SURF1 / 6834
• HGNCID: 11474
• Length: 300
• Species: Homo sapiens
• Sequence 2: NP_595631.1
• Gene: shy1 / 2540192
• PomBaseID: SPBC1215.01
• Length: 290
• Species: Schizosaccharomyces pombe
• Alignment Length: 263
• Identity: 85/263 - (32%)
• Similarity: 135/263 - (51%)
• Gaps: 28/263 - (10%)

Human    47 SAAEASATKAEDDSFLQWVLLLIPVTAFGLGTWQVQRRKWKLNLIAELESRVLAEPVPLP--ADP 109
            |..|.:..:.:.:.||..:|..:|:..|.||||||:||:||:.:|..|..|:....:.||  ...
pombe    24 STLEGTTVRPKKNKFLVGLLSAVPIVTFALGTWQVKRREWKMGIINTLTERLQQPAILLPKTVTE 88

Human   110 MELKNLEYRPVKVRGCFDHSKELYMMPRTMVDPVREAREGGLISSSTQSGAYVVTPFHCTDLGVT 174
            .:.|.||:..|.:||.|.|.:|:.:.|||        :||       |.|.:|||||...| |..
pombe    89 QDTKKLEWTRVLLRGVFCHDQEMLVGPRT--------KEG-------QPGYHVVTPFILDD-GRR 137

Human   175 ILVNRGFVPRKKVNPETRQKGQI-EGEVDLIGMVRLTETRQPFVPENNPERNHWHYRDLEAMARI 238
            ||||||::.|......:|....: :|.|.:.|::|....:..|:.:|.||:|.:::.::...|::
pombe   138 ILVNRGWIARSFAEQSSRDPSSLPKGPVVIEGLLRQHTDKPRFMMKNEPEKNSFYFLNVREFAQL 202

Human   239 TGAEPIFIDANFQSTVP---------GGPIGGQTRVTLRNEHLQYIVTWYGLSAATSYLWFKKFL 294
            .|..||.|.....|..|         |.|:|...:|.:.|.|.:||:|||.||..::.:.:..|.
pombe   203 KGTLPILITELQPSLTPLQEADHVKRGLPLGHPLKVEIFNSHTEYIITWYSLSVVSAIMLYVYFK 267

Human   295 RGT 297
            ||:
pombe   268 RGS 270

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SURF1	NP_003163.1	SURF1	74..288	CDD:119401	76/225 (34%)
shy1	NP_595631.1	SURF1	50..261	CDD:119401	76/226 (34%)