DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnf13 and gzl

DIOPT Version :10

Sequence 1:NP_001102914.1 Gene:Rnf13 / 681578 RGDID:1594062 Length:380 Species:Rattus norvegicus
Sequence 2:NP_649653.1 Gene:gzl / 40791 FlyBaseID:FBgn0037442 Length:536 Species:Drosophila melanogaster


Alignment Length:375 Identity:136/375 - (36%)
Similarity:202/375 - (53%) Gaps:51/375 - (13%)


- Green bases have known domain annotations that are detailed below.


  Rat    14 QVYTILTVQLFAFLNLLPVEADILAYNFENAS--QTFEDLPARFGYRLPAEGLKGFLINS-KPEN 75
            |:.|:|.:.|......| |...:|.|....:.  :.|.||||:||..||:.|||.:::.: :|..
  Fly     7 QILTLLGLCLVCHEATL-VGGHVLVYRKATSQLIEEFNDLPAQFGPNLPSNGLKVYVVPARRPYY 70

  Rat    76 ACEPI-VPPPLKDNSSGTFIVLIRRLDCNFDIKVLNAQRAGYKAAIVHNVDSDDLISMGSNDIDI 139
            .|:.: .||.||...|..|:.|:.|.:|.|:.|:..||.|.|.|.||:|.:.|||..|.:.:|  
  Fly    71 GCDSLDRPPHLKYPPSAKFVALVARGECVFERKIRVAQNASYSAVIVYNNEGDDLEQMSAENI-- 133

  Rat   140 LKKIDIPSVFIGESSANSLKDEFTYEKGGHVILVPELSLPLE---YYLIPFLIIVGICLILIVIF 201
             ..|.|||||:|.::..:|...||.|    |:|:....||..   ..::||.|::|:|.|::||:
  Fly   134 -TGIRIPSVFVGHTTGKALATYFTTE----VVLIINDELPFNINTQLILPFSILIGMCFIIMVIY 193

  Rat   202 MITKFVQDRHRNRRNRLRKDQLKKLPVHKFKK---GDEYDVCAICLEEYEDGDKLRILPCSHAYH 263
            ||.|.::::.|.||:||.|..||||||.::.|   .::||.|.||||::.:.||||:|||||.||
  Fly   194 MIYKCIREQRRLRRHRLPKSMLKKLPVLRYTKNNANNKYDTCVICLEDFIEDDKLRVLPCSHPYH 258

  Rat   264 CKCVDPWLTKTKKTCPVCKQKVV------------PSQG---DSDSDTD---SSQEEN-----QV 305
            ..|:|||||:.::.||:||:||.            ||..   |:|.||.   ..|:.|     ||
  Fly   259 THCIDPWLTENRRVCPICKRKVFTKGEARASRSRQPSLDNVTDTDDDTTPLLQQQQSNGRQVGQV 323

  Rat   306 SE---------HTPLLPPSASARTQSFGSLSESHS-HHMTESSDYEDDDN 345
            |.         .:..:..:|.|.|...|:....|: .:..|.|...||:|
  Fly   324 SSASSAGGAAGSSSSVAAAAVAGTTRHGTFRRGHAGRNPFEESQSSDDEN 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rnf13NP_001102914.1 PA_C_RZF_like 23..180 CDD:239038 57/160 (36%)
RING-H2_RNF13 230..288 CDD:438450 31/72 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 285..380 22/94 (23%)
gzlNP_649653.1 PA_C_RZF_like 14..171 CDD:239038 58/164 (35%)
RING-H2_RNF13-like 233..278 CDD:438327 26/44 (59%)

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